XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCACGTGAAAT
TCTCTTCCCTACTGGCTATATTTCTTAGTGCCAGAAGGTAATACGCAGGC
TGATAGGGGAGAAGAGACATCAGTGGTCTTACCCAGTACTACAAATAACC
CCCACCCCCAAGGAGAAGTTTGTCAACTGCTTCAATACTGATGTAGCTGC
TATGGAATGATTCATCCTCATCACATTCTGATTATTCTGATTTTCTGTGT
GAAGTGCATCATGGAAAATTAACAGTGGACACATGCTCAAAAGAGAATTA
TATTCCCTTTCCTAGTGAAAGAAAGATGAAATTTCAAGACCTGTAAGTCA
TATATAAAGTACTCAGAAATTGCTGGTTGTTTGTGAGTCTAGAGGCTGTC
TGGGGCTGAGCAAAAAGAAAAAAAACCTGGGTATACCCCGTAGTTAAAAT
ATTCCTGGGAACAGCTTAACTTTAAAGATAAAGAGGAATGTGAGGACATA
ACAGGGCTATCTAAACTGAGTCAACAATTCACAGAACTCTGACACCCTGC
ACGTACATGTAATTTTTCTGCTGATGTTTGAATAAGCCAATAGTGTGTTG
ATATGCTGAATTCCACATCCTTAAGACCCTTAACCCATAAAAATTCCTAG
CTTCCTAGCCTCGTGGCCATCATCCGTTATCTCCTGTGTGGGATGCATGT
CAGCCCGGAGCTCCATATTAAATGACCTCATGTANTTACATCAAGATGGT
CCTTCCCGN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGAATGGGTGTTGGAT
CTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGATTTTTGT
CTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTCGTATATTA
AACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGAT
TGCTTTAATGTGTTCTTGGATTCTGTTAGAGAGAATTTTATTGAGGATTT
TTGCATCGATATTCTTAATAGAAATTGTCCTGGAAGTTCTCTATCTTTGT
TGGATCTTTCTGAGGATTAGGTATCATAGTAATAGTGGCTTCATAAAATG
ACTGTGCTACAGTACCTTCTACTTCTATTTTGAGAAATAAATTGTGGAGA
ATTGGAATTAGATCTTCTTTGAATGTCTGATATAACTCTGCACTAGAACC
ATCTGCTACTGGGCTTTTTTATGATGACAGACTATTTATAACTGCTTCTA
TTTCTTTAGGNGATATGGGACTGTTTAAATGGGCAACTTGATCCTGATTT
CACTTTGGTACCTGGTATCTGTCCCAAAATTTGTCCCTTTCTTCCAGGTT
TTCTTTTTTGTTGAGAATAAACCCTTTTAAAAAGAACTGAGGGGGTTTTG
CATTTCTTCCTAATTGGTTTTTGCTCCCCTCTCCCCCTTGTTATTTAATT
TGAAATTGTTCTT

Query= MSMg01no413_d22.b1 MSMg01no413_d22.b1 CHROMAT_FILE:
MSMg01no413_d22.b1 PHD_FILE: MSMg01no413_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:52 2005
         (626 letters)



>mm_chr5_11706541_11707566
          Length = 1026

 Score = 1002 bits (518), Expect = 0.0
 Identities = 598/638 (93%), Gaps = 25/638 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttccctactggctatatttcttagtgccagaaggtaatacgcaggctgataggggagaa 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cttccctactggctgtatttcttagtgccagaaggtaatacgcaggctgataggggagaa 571

                                                                       
Query: 61  gagacatcagtggtcttacccagtactacaaataacc------cccaccccc-------- 106
           ||||||||||||||||||||||||| |||||||||||      |||||||||        
Sbjct: 570 gagacatcagtggtcttacccagtaatacaaataaccgccccgcccaccccccccccccc 511

                                                                       
Query: 107 --aaggagaagtttgtcaactgcttcaatactgatgtagctgctatggaatgattcatcc 164
             ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 510 cgaaggagaagtttgtcaactgcttcaatactgacatagctgctatggaatgattcatcc 451

                                                                       
Query: 165 tcatcacattctgattattctgattttctgtgtgaagtgcatcatggaaaattaacagtg 224
           ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||
Sbjct: 450 tcatcacattctgattattctgactttctgtgtgaattgcaccatggaaaattaacagtg 391

                                                                       
Query: 225 gacacatgctcaaaagagaattatattccctttcctagtgaaagaaagatgaaatttcaa 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gacacatgctcaaaagagaattatattccctttcctagtgaaagaaagatgaaatttcaa 331

                                                                       
Query: 285 gacctgtaagtcatatataaagtactcagaaattgctggttgtttgtgagtctagaggct 344
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gacctgtaaatcatatataaagtactcagaaattgctggttgtttgtgagtctagaggct 271

                                                                       
Query: 345 gtctggggctgagcaaaaagaaaaa-aaacctgggtataccccgtagttaaaatattcct 403
           | ||||||||||| ||||||||||  |||||||||||| |||||||||||||||||||||
Sbjct: 270 gcctggggctgagaaaaaagaaaagcaaacctgggtatgccccgtagttaaaatattcct 211

                                                                       
Query: 404 gggaacagcttaactttaaagataaagaggaatgtgaggacataacagggctatctaaac 463
           |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 210 gggaacagcttaaccttaaagataaagaggaatgtgaggacataacagggctgtctaaac 151

                                                                       
Query: 464 tgagtcaacaattcacagaactctgacaccctgcacgtacatgtaatttttctgctgatg 523
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 150 tgagtcaacaattcacagaactctgacaacctgcacgtacatgtaatttttctgctgatg 91

                                                                       
Query: 524 tttgaataagccaatagtgtgttgatatgctgaattccacatccttaagacccttaaccc 583
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  tttgaataagccaatagtgtgttgatatgctgaattccacatccttaagacccttaaccc 31

                                                 
Query: 584 ataaaaattcctagcttcctagcctcgtggccatcatc 621
           |||||||   ||     |||||||||||||||||||||
Sbjct: 30  ataaaaa---ct-----cctagcctcgtggccatcatc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)