CGACTCCTATATTCAGAGAATCCGCGGAATTCCAGGTCCATTGCGAGAGC
CAATCTGAAGCAGTGTCATCTCTCTGCTGCCTGTGATCACTTCTTCCAAG
AACACTTGCTGTTGGCATCACAGAGGAATGCCTGCAACTTATAATCAATG
TCTTAGAACCTGAATCACTGAACACTTCTTCCGTAACTGCCAGCCCAAAC
CTCAGACATGTTAAGAGGTCTTGACCTGCTTTAAAACTCTGGAGGGAGTA
AACAGGTAAGAACCATTAACAGATTAAAGGGAACAACTGTCATGCATGGT
CTTTCTCAGAGAAGAGATCATTCCAACAATGACATCACCAGGGTGAAAGA
TGAAAGCACCTGTGTCTAATGGCCATACACAGTGATACACATCCAATCGG
ACAGAGTCTAGGCCCTCTTGAAAGCCATGGAAAGGGACATAAAATGTTTC
TATACTCTGGGTGCAAAGGGCAAAACTCTATTTTTATTTGGTTCAATTTG
TTAGTGGTGCCCTCAGTCACAACACTGCTCAGTCACCTGATACCAAGTTT
ATGTCCTCATTCGCTGTGTGAAGACAGAGAAACAGATATACTTAGAGGAT
GGAGAGAGAACTCTGTAGTTACACCTTATGAATACTGTGTGCACAGTGGA
TGCGAGCTCAGTTCTTAACACCTACAACAGGAATTTAATACATCTTGTAA
CTCAGCTCCAGGAACCTGAG

TCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAATTTGTACAATTGTAGGGATAG
AATGGCTGTTTTCCCACCGCCTCTGGGTGGTTGTTCTTCCATATCTGAGT
GTGATGAGTACAGAGGTGTAGGTGTGTGTAGGTGTGTGTGTGTGCTCTTG
TGCATATATGCTCATGCACACGTGGATGCTAATACCTGCTTTTTGCACTT
CATGACTTTTTTATGTATGCCGTTTGTCTTCCTGATTCTTTTCCATTATT
GTCTTTTGCTGAAGGTGCTTTCTTTTTTTTTTTTGGTTACCCCCCTATTG
CCTTGTTTCCTCTTTTTCCTTTCTTCTTTTCCTATCTTTTTCACTTTTTT
TTTTTTCTTTCTTCTTTTTGAGGATCCCCCTTCTCTCTCTCTTTTCCCTT
CTTTTTCTTCTTTTCTTCTACCCTATTTTTTTTCTTTCCTCCTTCTCCCC
TTTCTTTCCTTCTCCTTATCCTATCTTTCTCCCCTCCCTCTTTATTACCT
TTCTCCCCCTTCCTTCTCTCTCCTTTCTTTTCCTCTCCTTTCTTCTACTC
GTTCTCTTCTCTTCGTTATTCCCGCTCTCGCATCCTCCCTTTCCTCTTCG
TTCACGTTCTCTTCTCGTTCCTTCGTTTTCTTTCTCCTCGTTTTTCTTTG
TATTTCCCCTTTGTCCGTATCGCTCGTTCTTAACGTTATCTACGTTTTTC
TTCGCCCGTTCTCCATACCTTTCTCCTTATTCCTTCGTTTTTCTTTTCCC
GGTCTCGATTTCGCACCCGTCTCTCTTCGCCTTTCTTCGTTATTCCCTCT
TCCTTN

Query= MSMg01no416_i06.b1 MSMg01no416_i06.b1 CHROMAT_FILE:
MSMg01no416_i06.b1 PHD_FILE: MSMg01no416_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:09 2005
         (525 letters)



>mm_chr5_132502562_132503485
          Length = 924

 Score =  946 bits (489), Expect = 0.0
 Identities = 516/525 (98%), Gaps = 1/525 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaatctgaagcagtgtcatctctctgctgcctgtgatcacttcttccaagaacacttgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaatctgaagcagtgtcatctctctgctgcctgtgatcacttcttccaagaacacttgc 260

                                                                       
Query: 61  tgttggcatcacagaggaatgcctgcaacttataatcaatgtcttagaacctgaatcact 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 261 tgttggcatcacagaggaatgcctgcaacttataatcaatgtcttaaaacccgaatcact 320

                                                                       
Query: 121 gaacacttcttccgtaactgccagcccaaacctcagacatgttaagaggtcttgacctgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacacttcttccgtaactgccagcccaaacctcagacatgttaagaggtcttgacctgc 380

                                                                       
Query: 181 tttaaaactctggagggagtaaacaggtaagaaccattaacagattaaagggaacaactg 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaaaccctggagggagtaaacaggtaagaaccattaacagattaaagggaacaactg 440

                                                                       
Query: 241 tcatgcatggtctttctcagagaagagatcattccaacaatgacatcaccagggtgaaag 300
           |||||||||| |   | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatgcatgggcagcc-cagagaagagatcattccaacaatgacatcaccagggtgaaag 499

                                                                       
Query: 301 atgaaagcacctgtgtctaatggccatacacagtgatacacatccaatcggacagagtct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 500 atgaaagcacctgtgtctaatggccatacacagtgatacacatccaatcggacagagtca 559

                                                                       
Query: 361 aggccctcttgaaagccatggaaagggacataaaatgtttctatactctgggtgcaaagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggccctcttgaaagccatggaaagggacataaaatgtttctatactctgggtgcaaagg 619

                                                                       
Query: 421 gcaaaactctatttttatttggttcaatttgttagtggtgccctcagtcacaacactgct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcaaaactctatttttatttggttcaatttgttagtggtgccctcagtcacaacactgct 679

                                                        
Query: 481 cagtcacctgataccaagtttatgtcctcattcgctgtgtgaaga 525
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cagtcacctgataccaagtttatgtcctcattcgctgtgtgaaga 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 924
Length adjustment: 10
Effective length of query: 515
Effective length of database: 914
Effective search space:   470710
Effective search space used:   470710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)