CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATCCGCGGA
ATTCAATGAAAGTTTACATAAACCATACCCAAACTTATGGGACACAAGGA
AACCTGTACTATAAAGAAAGGTCATACGCACTAAAGTGTAACCCTTCAAA
AAAATTTTTGAAGCCGATTAACTTAACTTATTCCCAAAAATTTAAACAAC
TACCTGAAAAGCCTTAAAACGAAAAAAAATAAAAACACCCCTGAAAAAGA
AGATTGTGGCGGAAATACCTAACCCATTTTAAACCCAGGAGCCCCCCCCA
AAAAACCCTGGGTTGAAAAAGTGGGCCCTTTGAAAAAACCCCATTTTTTT
TTTAACCCCTAAAAAAAACTTTTTAAAAAGGGAAGAAATAATATTCCCCC
CCCAATAAAACCCCCCAAAAGAAAAAGGGGGGCAACACACCCAAAAAAAA
ATAGTAATTCCCAAAAGGCTTTGGGGGGGCTCCACTTCCAAAAAAAAAAT
ACCCCCCCCCAAAAAATGGGATAGGGTCCCCCCTCCGCGCGGGGCTGGAG
GGCTACAAACTCCCCCCTCCTTGCATCAAAAAAAACACACTTATCAACTC
CCTCCACTCTCTTGTTTTCTTCCATAAACTCCGACATGTTACACAACTAA
CCAA

GGGGTAGTAGAGGAAGGGATGTGGGGAGTGGAGGAGGAGGGAGGAGGAGA
GGGGGNNNNGGTTGTGGANNNGCGATGATXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTA
TGTTTGCATGAAAATTATATTGATTCCTCAGAAAGATCCTGAGGAATCAT
TTTAGGAAGGGGCAGACCACATGCACTGCAGAAACACGAAAGGAAAGAGA
TTTGTCTTAGTTAGGGTTTCTATTCCTGCACAAAACGTCATAACCAAGAA
GCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTACAATTCCTCACTGCTGT
TCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAAGAAACATG
AGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCTCCT
GGCTTGCTCAGCCTGCTCTCTTTTAGAACCCAAGACTACCAACGCAGAGA
TGGTCCCACTCACAAGGGGCTTTTCCCCCTTGATCACTAATTGAGAACAT
GCCTTACAGTTGGATCTCATGGAGGCATTTCCCCAACTGAAGCTCCTTTC
TCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCACTACAA
TTGACCCCTTGACAACTTGACACACAAACACATCACTAGTAAGCCTCAAC
CGTTAGTTCTTATTCATACCCAACATCTAAACAACTTTAAAAGTCCCACA
GTCTTTACAAAATAACAGTTCAATCCTTTTAAAATATCCAATGTCTTTTA
AAAATCCAGGGCTTTTTACGAA

Query= MSMg01no416_k05.g1 MSMg01no416_k05.g1 CHROMAT_FILE:
MSMg01no416_k05.g1 PHD_FILE: MSMg01no416_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:19 2005
         (527 letters)



>mm_chr5_47389522_47390448
          Length = 927

 Score =  957 bits (495), Expect = 0.0
 Identities = 519/527 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttatgtttgcatgaaaattatattgattcctcagaaagatcctgaggaatcattttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttatgtttgcatgaaaattatattgattcctcagaaagatcctgaggaatcattttag 260

                                                                       
Query: 61  gaaggggcagaccacatgcactgcagaaacacgaaaggaaagagatttgtcttagttagg 120
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 261 gaaggggcagaccacatgcactgcagaaacacgaaaggaaagggatttgtcttagtcagg 320

                                                                       
Query: 121 gtttctattcctgcacaaaacgtcataaccaagaagcaagttggggaggaaagggtttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttctattcctgcacaaaacgtcataaccaagaagcaagttggggaggaaagggtttat 380

                                                                       
Query: 181 tcagcttacaattcctcactgctgttcatcaccaaaggaagtcaggactggaactcaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagcttacaattcctcactgctgttcatcaccaaaggaagtcaggactggaactcaagc 440

                                                                       
Query: 241 aggtcaagaaacatgagctgatgcagaggccatggagggatgttctttactggcttgctt 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtcaagaaacaggagctgatgcagaggccatggagggatgttctttactggcttgctt 500

                                                                       
Query: 301 ctcctggcttgctcagcctgctctcttttagaacccaagactaccaacgcagagatggtc 360
           ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 501 ctcctggcttgctcagcctgctctcttatagaacccaagactaccaacacagagatggtc 560

                                                                       
Query: 361 ccactcacaaggggcttttcccccttgatcactaattgagaacatgccttacagttggat 420
            ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcacccacaaggggcctttcccccttgatcactaattgagaacatgccttacagttggat 620

                                                                       
Query: 421 ctcatggaggcatttccccaactgaagctcctttctctgtgataactccagctgtgtcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcatggaggcatttccccaactgaagctcctttctctgtgataactccagctgtgtcaa 680

                                                          
Query: 481 gttgacacaaaactagccactacaattgaccccttgacaacttgaca 527
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttgacacaaaactagccactacaattgaccccttgacaacttgaca 727


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space:   474089
Effective search space used:   474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)