Query= MSMg01no418_l07.b1 MSMg01no418_l07.b1 CHROMAT_FILE:
MSMg01no418_l07.b1 PHD_FILE: MSMg01no418_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:58 2005
(569 letters)
>mm_chr14_19773029_19773997
Length = 969
Score = 1079 bits (558), Expect = 0.0
Identities = 564/566 (99%)
Strand = Plus / Plus
Query: 4 ggaattcactctgttgcccaggctggcttggaactaattttgagctggctgttactattt 63
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 204 ggaattcactctgtagcccaggctggcttggaactaattttgagctgcctgttactattt 263
Query: 64 cagtctccagagttttgtgagcaacatgagatatcacatgtgtgttaccatgactgtcta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagtctccagagttttgtgagcaacatgagatatcacatgtgtgttaccatgactgtcta 323
Query: 124 gggctgctattttctgttgatacaatttttagtagtctagcatgcttgcttttcaaaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggctgctattttctgttgatacaatttttagtagtctagcatgcttgcttttcaaaaaa 383
Query: 184 gaatgtctagaaataaattccaagatgatggttgggagcccatttactgcttatagggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaatgtctagaaataaattccaagatgatggttgggagcccatttactgcttatagggaa 443
Query: 244 ggagcaacattgtccctctgggttcatgcttctcttgacacaggacactttcagagcagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggagcaacattgtccctctgggttcatgcttctcttgacacaggacactttcagagcagt 503
Query: 304 actcatcagtgtccactgtggtcttgtggaacactgcccaactagtgaatttaactgtaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 actcatcagtgtccactgtggtcttgtggaacactgcccaactagtgaatttaactgtaa 563
Query: 364 cactgcccaaacttcctgttcttaccccttcttatgtgttttctcaaatgggctcagccc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cactgcccaaacttcctgttcttaccccttcttatgtgttttctcaaatgggctcagccc 623
Query: 424 ctttctgaatattcttgcatggtttgtaccttggacttaggtatgcaagatttagaagag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctttctgaatattcttgcatggtttgtaccttggacttaggtatgcaagatttagaagag 683
Query: 484 ctcacaattttcaggtttcacattccttttaaatgttgagcatggtatctttcaagtctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctcacaattttcaggtttcacattccttttaaatgttgagcatggtatctttcaagtctc 743
Query: 544 tttcagctctatagtaccttttctat 569
||||||||||||||||||||||||||
Sbjct: 744 tttcagctctatagtaccttttctat 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_l07.g1 MSMg01no418_l07.g1 CHROMAT_FILE:
MSMg01no418_l07.g1 PHD_FILE: MSMg01no418_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:59 2005
(419 letters)
>mm_chr5_3046291_3047107
Length = 817
Score = 431 bits (223), Expect = e-125
Identities = 290/321 (90%), Gaps = 18/321 (5%)
Strand = Plus / Minus
Query: 2 gtcctgaaaattgtacctcatgggtgaagtttgcagagttagagacaatccttggtgatg 61
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtcctgaaaattgtacctcatggatgaagtttgcagagttagagacaatccttggtgatg 251
Query: 62 ttgagagacatcgggcaatctatgaattagccttcagccagctacaatcattaatgagtg 121
|||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct: 250 ttgagagacaccgggcaatcta--aattagccttcagccagctataatcattaatgagcg 193
Query: 122 atatccagtttggactctatctctctttcattttatgagcttttcatttagactgcttac 181
||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 192 atatccagtgtggactctatctctctttcattttatgagattttcatttagattgcttac 133
Query: 182 gtataaaattttcatatatatat-atatatatatatatatatatatatatatatataatt 240
|||||||||||||||||| |||| | | || || ||||||||| ||||
Sbjct: 132 gtataaaattttcatatacatatgaaa-at-tacatatatata-------------aatt 88
Query: 241 gaaagctactgttttattaggttttcatacaactcctcaattggacatttttagttttac 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gaaagttactgttttattaggttttcatacaactcctcaattggacatttttagttttac 28
Query: 301 ctgcactactcacagtccttc 321
||||||| |||||||| ||||
Sbjct: 27 ctgcactcctcacagttcttc 7
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 817
Length adjustment: 9
Effective length of query: 410
Effective length of database: 808
Effective search space: 331280
Effective search space used: 331280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
