NGGGGTTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGGATC
CGCGGAATTCCTTCCAATGTATGGAATTTTAATTGACATTTTGATCATCT
AATTGTATTTCTCAATTACTATCTCAATGAGAGCCTTCCTCAAATATTTT
TTTCTGCTGACTGATTAAATACCCATACTGTTCCAGAAAAGCAATTGACT
AAATTTTTCAGTTTTCAGCAATGTTGTTAACTAATTGTTCTTAGGTTTTT
ATTTGCTTCTGACTCTTCAGGGAATCCTCACTAAAAGCTAGATAAATCTC
CCATAATAAACAACATTTCAGCCATCTTACAGCTGAACTGAAAACTTCCA
TAGCCTGGGTAAAAATGCTGAAAATTCATGTGATTTTTCTTCAGATACTC
ACAGCCAACCATTGAACTGAACCCTGGGACCGCAGTGGAAGAGTTCAGGG
AAGGACTGAAGGAGCTGAATGGGATTACAGTCCCATAGTANAAACAATAT
CAACTAACCAGATCCCACAAAGCTCCCAGGGACTAAACCACCAACCAAAG
AATACACATGGAGGGACCCATGGCTCTAGCTACATATGTAGCAGAAGAAT
TGCTTATCTGTCATCATGGGGAAGGGAAGTTCCTTGTTCTGTGGAGGCTT
GGAACCCCCCGGTAGGGGAAGCCTAAATGGGGAGGCACAAAGGGTGGTGT
TTTTCCTTTCCTTTTATTTTCTCCATCTTTCTTTCTCCCATTCCTCCCTC
TCCCCTCTACTTCTTTCCCTCC

NNNNCCGATGCTATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTTTAT
CATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACTAGA
TGATCATGTGGCTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACATTG
ATGGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTAC
TTGGTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGA
GAATTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTG
AAGTTCTCTATCTTTGTTGGATCGTTCTGTGGTTTAGGTATCAGAGTAAT
AGTGGCTTCATAAAATGAGTTGGGTAGAGTACTTTCTACTTCTATCTTGT
GAAAAAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAG
AACTCTGCACTAAACCTGTCTGGGCCTGGGCTTTTTTTGGCTGGGAGACC
ATTTATAACTGCTTTCATTTCCTTAGGGGGATATTGGGATGGTTTTATAA
GTCCCCTTGGTCCCCGGATTCACTTTTTGGACCCGGGAATCGGTCCCAAA
ATTTTCCTCTTTCTTCTCAGTTTCTCCTTTTTTTGGTAAAAACCCCTTTC
CTAAAGATCTGCACGCCTTTCTTCTCTACTTTTCTTTTTCTTCCCTTCGT
CCCCCTTTCTTTCTTTGTTTTTCAATACTAACTA

Query= MSMg01no421_l23.b1 MSMg01no421_l23.b1 CHROMAT_FILE:
MSMg01no421_l23.b1 PHD_FILE: MSMg01no421_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:02 2005
         (456 letters)



>mm_chr5_68538125_68538980
          Length = 856

 Score =  822 bits (425), Expect = 0.0
 Identities = 445/452 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattccttccaatgtatggaattttaattgacattttgatcatctaattgtatttctc 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattccttccaatgaatggaattttaattgacattttgatcatctaattgtatttctc 264

                                                                       
Query: 65  aattactatctcaatgagagccttcctcaaatatttttttctgctgactgattaaatacc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattactatctcaatgagagccttcctcaaatatttttttctgctgactgattaaatacc 324

                                                                       
Query: 125 catactgttccagaaaagcaattgactaaatttttcagttttcagcaatgttgttaacta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catactgttccagaaaagcaattgactaaatttttcagttttcagcaatgttgttaacta 384

                                                                       
Query: 185 attgttcttaggtttttatttgcttctgactcttcagggaatcctcactaaaagctagat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attgttcttaggtttttatttgcttctgactcttcagggaatcctcactaaaagctagat 444

                                                                       
Query: 245 aaatctcccataataaacaacatttcagccatcttacagctgaactgaaaacttccatag 304
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 aaatctcccataataaacaacatttcagccatcttacaactgaactgaaaacttccatag 504

                                                                       
Query: 305 cctgggtaaaaatgctgaaaattcatgtgatttttcttcagatactcacagccaaccatt 364
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctggggaaaaatgctgaaaattcatgtgatttttcttcagatactcacagccaaccatt 564

                                                                       
Query: 365 gaactgaaccctgggaccgcagtggaagagttcagggaaggactgaaggagctgaatggg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaactgaaccctgggaccgcagtggaagagttcagggaaggactgaaggagctgaatggg 624

                                           
Query: 425 attacagtcccatagtanaaacaatatcaact 456
           ||| ||| ||||||||| |||||| |||||||
Sbjct: 625 attgcagccccatagtaaaaacaagatcaact 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)