Query= MSMg01no421_n16.b1 MSMg01no421_n16.b1 CHROMAT_FILE:
MSMg01no421_n16.b1 PHD_FILE: MSMg01no421_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:10 2005
(504 letters)
>mm_chr5_80085756_80086660
Length = 905
Score = 683 bits (353), Expect = 0.0
Identities = 365/369 (98%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 1 tagaccatgtagagaacaaaactgttcacaatg-aaaaaatctacagaatgtgggaatcc 59
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 369 tagaccatgtagagaacaaaactgttcacaatgaaaaaaatctacagagtgtgggaatcc 310
Query: 60 gggctccaagagatatatcacattacagcttctacatttaatatcacaaaagagggctgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gggctccaagagatatatcacattacagcttctacatttaatatcacaaaagagggctgg 250
Query: 120 gaagatttttaaaatctaagaaatctcctgtgaaatcatcctttatagaatggctttata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gaagatttttaaaatctaagaaatctcctgtgaaatcatcctttatagaatggctttata 190
Query: 180 actaggtctggatcaatagtaatatcaatggacatgttactgtggaagtatgaaattttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 189 actaggtctggatcaatagtaatatcaatggacatgttactgtggaagtatgaaaatttc 130
Query: 240 agagttctacccctatttagagaactaaaggcaactaataactgcggagagtaggagaat 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agagttctacccctagttagagaactaaaggcaactaataactgcggagagtaggagaat 70
Query: 300 tagcctcttccattgatgagccacttatttattgtcttatacagagtagtaaggcttgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tagcctcttccattgatgagccacttatttattgtcttatacagagtagtaaggcttgaa 10
Query: 360 gccataaat 368
|||||||||
Sbjct: 9 gccataaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 905
Length adjustment: 10
Effective length of query: 494
Effective length of database: 895
Effective search space: 442130
Effective search space used: 442130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_n16.g1 MSMg01no421_n16.g1 CHROMAT_FILE:
MSMg01no421_n16.g1 PHD_FILE: MSMg01no421_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:10 2005
(431 letters)
>mm_chr5_79964258_79965088
Length = 831
Score = 789 bits (408), Expect = 0.0
Identities = 426/432 (98%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgtacaccattttttaatagggttattttttt-cctttgtctaacttc 59
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 tttgtttagctctgtacaccattttttaatagggttatttttttccctttgtctaacttc 259
Query: 60 tattttgatggattcttcggcctgaatgtgttcctgcttatttatttttcaaaatgaaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tattttgatggattcttcggcctgaatgtgttcctgcttatttatttttcaaaatgaaac 319
Query: 120 tccgtaggtagcaggcttagaaagatgattgaacatgagataatgaaaagtgttcgccct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccgtaggtagcaggcttagaaagatgattgaacatgagataatgaaaagtgttcgccct 379
Query: 180 ttaaaagaagcctcaggaaacctcctcaccctgtgtaccatgttcctttgtccagagaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttaaaagaagcctcaggaaacctcctcaccctgtgtaccatgttcctttgtccagagaag 439
Query: 240 ataatcctgatgacaacaaatggactttgagttttcagtctattgaactgtgtgaaaaac 299
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 ataatcctgaggacaacaaatggactttgagttttcagtctattgaactatgtgaaaaac 499
Query: 300 atttctttcttataaaaaacccacagtatttgataatttattttaaccaaatagatgcaa 359
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 500 atttctttcttataaaaaacccacagtatttgataatttattttaagcgaatagatgcaa 559
Query: 360 ttatattttattcattatattcacatgtacttgtatgtgaggttcatgtggatacacaaa 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttatattttagtcattatattcacatgtacttgtatgtgaggttcatgtggatacacaaa 619
Query: 420 ggggcttggagg 431
||||||||||||
Sbjct: 620 ggggcttggagg 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
