XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTCA
CCTACTACAGCTGGCATTTCATCAGGTTCCTGCTGGCCTCTAAGTGAATT
TGGCTGTTGTACTACAAACACTAATTCAGTCTTAGCTTTGGTGAGTATTC
AAGGCAACTCTCCTATTTAGTGGCCTACACTACCGGTGGCCTCCTCGTCA
CAGGAAAGAGAACAGTGAGGCAGGACCTGGGGTACCATTTCCCCATCTGA
AAGCCCGCAGGCATGAAATGGGCTCCTGTATCATTCTTAAATCAAATGCT
ACAGTGCTCTCCTAGGATTAACCTGCCCGAATCGAAGAGCTTGGGACGTT
AACTGTTGATGATGTCACCTTACATTAAGGGCACCTAAAGTAAGAATTGT
TTACCCTGCCCCATTAGATCATTCAGAAAGACCTTGGTCTTCAGTCCAAC
TTTATATGTGGAGCTTCAGAATCTCACAACCAAGATTTGTATCTGGGTCT
TCTCTTAGTTCTTGCCCACAGAGTGGCGTCTCTCCCAAGCATAGTGCCCT
AGGTTGCAGTTTTCCATGCAGATCCTTGTGTGTCTCCTTGTTTTCTGATT
CCTGTTGGTCCTCACCCTTACTAGGATTTGTCCTGATCCTCCCTCATTCA
GGGTGCAGTGAACTTTGATGTGAGCATTGCACACTGGGAATGAGTCTTCC
CAGAGGCCAGNTTGCTGTTCCCCTTCCN

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGATCTGTACCCCATTTTTAA
TTGGGTTATTTGTTCTCAAGTTTCTTGAGTTCTTTATACTTGTGTCTGAT
GAGGAGGTGGTGAACATCTTTTCCCACTCTGTAGGCTGCCATTTTGTCCT
ACTGACAGTGTCCTTTGCCATACAGAAGCTTTTCATATTAAAGAGTTCCC
ATTTGTTAATTGTCCATTTCAGTTCCTGCAGTATTGGTTTTCTGTTCAGG
AAGTTGTCTTTTGTGTCAACACATTCAAGGTTATTCTCCACTCTCTCTTC
TATCGGTTTCAGCGCATCTGCTTTTATGCTGAGACCTTTGATCCACTTTA
ACTTGTGTTTTGCACAGGGTGATAAATGTATGCATTCTTCTGTATGCAGA
CATGTTTATAGACTGTAAATGCAGACAGTTTGAATAGCACCATTTGTTAA
AGATGCTACATTTTTTTCAGTGTGTGTTTATGGGTTTCTTTATAAAAAAT
CATGTGTCTGTNAGTGTGTGGATTTATATCAAGGTCTGCAGTTCCATTCC
ATTGATCAAGGGTTTGTTTTTATGGCAGCAGTATGAAGTTTGGCAGTTTT
TATCACTATAGCTCCCTAGTACACTTTGAAACAGGGATAGGGATGGCCCC
CCGCAGTTCTTTTTACTGACAAGAA

Query= MSMg01no425_a17.b1 MSMg01no425_a17.b1 CHROMAT_FILE:
MSMg01no425_a17.b1 PHD_FILE: MSMg01no425_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:09 2005
         (644 letters)



>mm_chr5_72063926_72064969
          Length = 1044

 Score = 1145 bits (592), Expect = 0.0
 Identities = 625/636 (98%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcttcacctactacagctggcatttcatcaggttcctgctggcctctaagtgaatttggc 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcttcacctactacagctggcatttcatcaggttcctgctggcctctaagtgaatttggc 268

                                                                       
Query: 69  tgttgtactacaaacactaattcagtcttagctttggtgagtattcaaggcaactctcct 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgttgtactacaaacactaattcagtcttagctttggtgagtattcaaggcaactctcct 328

                                                                       
Query: 129 atttagtggcctacactaccggtggcctcctcgtcacaggaaagagaacagtgaggcagg 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atttagtggcctacactaccggtggcctcctcgtcacaggaaagagaacagtgaggcagg 388

                                                                       
Query: 189 acctggggtaccatttccccatctgaaagcccgcaggcatgaaatgggctcctgtatcat 248
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 389 acctggggtaccatttccccatctgaaagcccgcaggcatgaaatgggctcctgtacctt 448

                                                                       
Query: 249 tcttaaatcaaatgctacagtgctctcctaggattaacctgcccgaatcgaagagcttgg 308
           || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 449 tcataaatcaaatgctacagtgctctcctaggattaacctgcccgaaacgaagagcttgg 508

                                                                       
Query: 309 gacgttaactgttgatgatgtcaccttacattaagggcacctaaagtaagaattgtttac 368
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gacattaactgttgatgatgtcaccttacattaagggcacctaaagtaagaattgtttac 568

                                                                       
Query: 369 cctgccccattagatcattcagaaagaccttggtcttcagtccaactttatatgtggagc 428
           | |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cttgccctgttagatcattcagaaagaccttggtcttcagtccaactttatatgtggagc 628

                                                                       
Query: 429 ttcagaatctcacaaccaagatttgtatctgggtcttctcttagttcttgcccacagagt 488
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 629 ttcagaatctcacaaccaagatttgtatctgggtcttctcttagttcatgcccacagaat 688

                                                                       
Query: 489 ggcgtctctcccaagcatagtgccctaggttgcagttttccatgcagatccttgtgtgtc 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ggcgtctctcccaagcatagtgccctaggttgcagttttccatgcagatccttgtgtgtc 748

                                                                       
Query: 549 tccttgttttctgattcctgttggtcctcacccttactaggatttgtcctgatcctccct 608
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 749 tccttgttttctgattcctgttggtcctcaccctcactaggatttgtcctgatcctccct 808

                                               
Query: 609 cattcagggtgcagtgaactttgatgtgagcattgc 644
           ||||||||||||||||||||||||||||||||||||
Sbjct: 809 cattcagggtgcagtgaactttgatgtgagcattgc 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space:   655556
Effective search space used:   655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)