Query= MSMg01no425_f21.b1 MSMg01no425_f21.b1 CHROMAT_FILE:
MSMg01no425_f21.b1 PHD_FILE: MSMg01no425_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:34 2005
(497 letters)
>mm_chr5_82661390_82662286
Length = 897
Score = 891 bits (461), Expect = 0.0
Identities = 467/469 (99%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 30 acacacacacacacacacacacacatccaagctaatatatacacagagcccttcatacag 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acacacacacacacacacacacacatccaagctaatatatacacagagcccttcatacag 288
Query: 90 agctatgtgggccccatgctttctgcctgtctctgtgagtctatatgtatggagtc-tgc 148
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 289 agctatgtgggccccatgctttctgcctgtctctgtgagtctatatgtatggagtcctgc 348
Query: 149 ttagttgattaagtgagtcatgttctcctggtgtcctccgtctctgactcctatcatctt 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttagttgattaagtgagtcatgttctcctggtgtcctccgtctctgactcctatcatctt 408
Query: 209 tctgccctctcttccgtgggcaaagttgtaatgtcttagtgtggattaaatttgtttgtg 268
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tctgccctctcttccttgggcaaagttgtaatgtcttagtgtggattaaatttgtttgtg 468
Query: 269 taaagtaagaactacttcatgaagctccattcttgtattttgtttgtttcctttgttgtt 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 taaagtaagaactacttcatgaagctccattcttgtattttgtttgtttcctttgttgtt 528
Query: 329 ggttggttggtttgttgttgttgtcattatgaacagcaaattactaaattgctgaggctg 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ggttggttggtttgttgttgttgtcattatgaacagcaaattactaaattgctgaggctg 588
Query: 389 aactcaaatgtgtaatcttcatggcccactctttccagtaagatgtgtgcaccatggtat 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aactcaaatgtgtaatcttcatggcccactctttccagtaagatgtgtgcaccatggtat 648
Query: 449 tactgcaaaataaattttgaattttgagttttaatgtttatgtttctta 497
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tactgcaaaataaattttgaattttgagttttaatgtttatgtttctta 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_f21.g1 MSMg01no425_f21.g1 CHROMAT_FILE:
MSMg01no425_f21.g1 PHD_FILE: MSMg01no425_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:34 2005
(418 letters)
>mm_chr5_82830671_82831488
Length = 818
Score = 772 bits (399), Expect = 0.0
Identities = 415/423 (98%), Gaps = 5/423 (1%)
Strand = Plus / Minus
Query: 1 aaaatgaatacatattcttggcaattggcaatgcttaaataattttctggttctttgaat 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 606 aaaatgaatacatattcttggcaattggcaatgcttaaataattctctggttctttgaat 547
Query: 61 tggtggctattcctgtagaagcaaacaactggaatcttatattcctggctccacgtttca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 546 tggtggctattcctgtagaagcaaacaactggaatcttatattcctggctccacctttca 487
Query: 121 tagcaataagccaaaggcatacaacaattgtggaaaatttaaatttttagaatgcttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tagcaataagccaaaggcatacaacaattgtggaaaatttaaatttttagaatgcttaaa 427
Query: 181 agttcttggtgaaatttgacatttacagaactgataaatccctccaatttacctctttaa 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 426 agttcttggtgaaatttgacatttacagaactgataaattcctccaatttacctctttaa 367
Query: 241 tgcctatttgaacattcaaaaggcttgtatatatggtattacagaaattaactaagtcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgcctatttgaacattcaaaaggcttgtatatatggtattacagaaattaactaagtcta 307
Query: 301 gcattcaactgcaacttatattccaagtgttgcttttttgtgtttgcttgcttggatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcattcaactgcaacttatattccaagtgttgcttttttgtgtttgcttgcttggatttt 247
Query: 361 tgctgttgtgaggaaaagcatgctttgccact-----aaaaaaaaaaaaaactgtttccc 415
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 246 tgctgttgtgaggaaaagcatgctttgccactaaaaaaaaaaaaaaaaaaactgtttccc 187
Query: 416 tta 418
|||
Sbjct: 186 tta 184
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
