NNNGGTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCGGTTAATGTATCCGGCCTGACCTTTGGAGAGGTGGGTCG
GAGGTGCCTTCACCTTCAGAGCGGTATCCTTCCTGTCCAGGATTTCCAAG
TTTGTCCAATCACCTGCACATGGGCACCACCTGCCAGGTTCAGCTAAACT
ATGTTCTCATGGCTCCCTCTGGTGTCCACAGCACGCAATAGCAGAAGGCC
GTTTGCTTCTTTGGAGGCAGACCATGGTGTAACCTAAGCCCCTTTGCTAT
TTGGGGACTTTGCTATGGCTCGATTTTGCAAGCTCTTGGTCTCTTGATGA
GAGAAATTAAAAATTGTCTCAGGAGGAAGTTTGATGATTTTGTTAGCGTT
TGAGAAAGCAAAACAAAACAAAACAAAACATGATTCCAGCTGGAGCTGAA
AGGATAAAGGTGTCGAAGAGGACAGAGAGCCACAGCAACGGAAGTCTGCA
GTCAGCTGTACATGGTAAGGGAGTCGCCAGAGAAACAAGAAAGACCAAGT
ATCAGCATGCTTAAGATTTGAGCTGGTATTTTGTGGGGAAGGGGAAGAAA
AAAAATTCCCCCCTTTTAATTAAAATTGAAAGGGCGTTATGCTTACTCAG
GGATGAACCCCTCTAAAACATCGCAAAATGCTTTCCTTACTCTTAACTTA
TAATATTTTCTCTCCTTTTTCCCCATATTTTTCCTAGCAAACATTTTACC
CTTATAAAAGCTCACACTTACTCTTGTACGGCC

NGGGCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAAGCAAGTCCATAGTTG
GCAAGCATCAGGAAATCAATGTGGCATATACTAAGAGCTCAAAAGAAAAT
TCTGGAATGGCTCTATGGATCAGAGTGAACTTTGGGAGTGGTGCAGGTCT
AAGCAACAGGTTTCTGACTCCCTGCCTATACAGTAGCGCCCAGAAATAAA
AGAAAACAAAGCATTGTCCTGATGAGCTGCCCACTCTCCCATCACCCCAT
TCTGTCTTACCCATGAATGAGCTTGCTCTGCTTTTTGAGACAGGGTCTCT
TGTAGCCTGTGCTGGCCTTGAACTCTCTCTCTAGCCAAGGATAACCTTGA
ATGTCTCATCATTCTCCCTCTGCCTCTTAATTGTTGGGATAACAGACATA
GACCAACCACACTCAGTGTATGCGGTGTCGGGTATTGAACCCAGAGCTCC
ATGCATGCTAAACAAGCGCTCTACACACTGAGCCACATCCCCTGCCTCCG
CAGTTCTGTCTTTAGAGAAAACAAGTTCCCTCTCCGTGGCAGCAGGAAAT
GCTCAGACACCCCTGAGCATGCCCTGAGCGCCCTTTTCCCTTCCATCTTA
GTGCACGCCAGGAGGGTGGTCAGACTCTTCCTTCGCCTTGGGTTCTGCAG
GCATTCCTTTGATGGGGCAAGGTGCACCCTGGGGCTGATTGTGTTCCTGG
GAGCTG

Query= MSMg01no427_m22.b1 MSMg01no427_m22.b1 CHROMAT_FILE:
MSMg01no427_m22.b1 PHD_FILE: MSMg01no427_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:47 2005
         (449 letters)



>mm_chr5_131905874_131906722
          Length = 849

 Score =  868 bits (449), Expect = 0.0
 Identities = 449/449 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgacctttggagaggtgggtcggaggtgccttcaccttcagagcggtatccttcctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgacctttggagaggtgggtcggaggtgccttcaccttcagagcggtatccttcctgt 260

                                                                       
Query: 61  ccaggatttccaagtttgtccaatcacctgcacatgggcaccacctgccaggttcagcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggatttccaagtttgtccaatcacctgcacatgggcaccacctgccaggttcagcta 320

                                                                       
Query: 121 aactatgttctcatggctccctctggtgtccacagcacgcaatagcagaaggccgtttgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactatgttctcatggctccctctggtgtccacagcacgcaatagcagaaggccgtttgc 380

                                                                       
Query: 181 ttctttggaggcagaccatggtgtaacctaagcccctttgctatttggggactttgctat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctttggaggcagaccatggtgtaacctaagcccctttgctatttggggactttgctat 440

                                                                       
Query: 241 ggctcgattttgcaagctcttggtctcttgatgagagaaattaaaaattgtctcaggagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctcgattttgcaagctcttggtctcttgatgagagaaattaaaaattgtctcaggagg 500

                                                                       
Query: 301 aagtttgatgattttgttagcgtttgagaaagcaaaacaaaacaaaacaaaacatgattc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtttgatgattttgttagcgtttgagaaagcaaaacaaaacaaaacaaaacatgattc 560

                                                                       
Query: 361 cagctggagctgaaaggataaaggtgtcgaagaggacagagagccacagcaacggaagtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagctggagctgaaaggataaaggtgtcgaagaggacagagagccacagcaacggaagtc 620

                                        
Query: 421 tgcagtcagctgtacatggtaagggagtc 449
           |||||||||||||||||||||||||||||
Sbjct: 621 tgcagtcagctgtacatggtaagggagtc 649


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space:   368321
Effective search space used:   368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no427_m22.g1 MSMg01no427_m22.g1 CHROMAT_FILE:
MSMg01no427_m22.g1 PHD_FILE: MSMg01no427_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:47 2005
         (536 letters)



>mm_chr5_132038230_132039165
          Length = 936

 Score =  826 bits (427), Expect = 0.0
 Identities = 442/447 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaagcaagtccatagttggcaagcatcaggaaatcaatgtggcatatactaagagctca 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 caaagcaagtccatacttggcaagcatcaggaaatcaatgtggcatatactaagagctca 391

                                                                       
Query: 61  aaagaaaattctggaatggctctatggatcagagtgaactttgggagtggtgcaggtcta 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aaagaaaattctggaatggcgctatggatcagagtgaactttgggagtggtgcaggtcta 331

                                                                       
Query: 121 agcaacaggtttctgactccctgcctatacagtagcgcccagaaataaaagaaaacaaag 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 330 agcaacaggtttctgactccctgcctatacagtagcacccagaaataaaagaaaacaaag 271

                                                                       
Query: 181 cattgtcctgatgagctgcccactctcccatcaccccattctgtcttacccatgaatgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cattgtcctgatgagctgcccactctcccatcaccccattctgtcttacccatgaatgag 211

                                                                       
Query: 241 cttgctctgctttttgagacagggtctcttgtagcctgtgctggccttgaactctctctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cttgctctgctttttgagacagggtctcttgtagcctgtgctggccttgaactctctctc 151

                                                                       
Query: 301 tagccaaggataaccttgaatgtctcatcattctccctctgcctcttaattgttgggata 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tagccaaggatagccttgaatgtctcatcattctccctctgcctcttaattgttgggata 91

                                                                       
Query: 361 acagacatagaccaaccacactcagtgtatgcggtgtcgggtattgaacccagagctcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 90  acagacatagaccaaccacactcagtgtatgcggtgtcgggtattgaacccagggctcca 31

                                      
Query: 421 tgcatgctaaacaagcgctctacacac 447
           |||||||||||||||||||||||||||
Sbjct: 30  tgcatgctaaacaagcgctctacacac 4


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)