XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTCTCTGCCTAATGAAATGTCTCACCCTGTTTCTTTACTATGTGAGAT
ATGAATGATTTTTGGTATGCCGAGTATTGTATATTTTACCTATCCATTAG
TCTCTTGGTAGCCATCTAAGTTATGTGTTCCTCTAAGGTTTGCAATGCCT
TTGTTCACAGAATGTGTATTTATTAAATAACTATTCTACCAGAAGCATAG
TTGTGGCAGCAATTAATATGTATCCAAAGAAGTGAAAGCACACTTGTTTT
TTGTCAGAGGTGAATATTTGATAGCTTATTATGTTGTGACTATGCAACAA
AAACCATGCACACGCACCTTATCTAGTTTGTTACCTCTCGAAGGTCTCTG
GAATCCATTGGCCTGTTGTCATGCAACCCCAACTCTCCATGGATAAAGAT
GTGATTCAATAGTTGTGCTAAAAAAGGTGAGCGAAGTTCTCAGAAGCATA
GCCACACCTTGGAACAATTCCTTCCAGAAAAAAGTGACAGGTTGTAAGAG
GCTGATGTCAAATTTTCCTTTACAGAACCTTTTTAAAGTGCACACCTCGG
CAATTGGTCAATGCCTATATAGATTTAATAAAATAAAAGTTTTCCCCCCA
AATTTCATTGGGAACTTTGCATCTGCTGAAAAAAATGAAAAAAAATTTTT
ATTTTTATCAACACCAAACCCCCATGTGGTTGGTACCCTGTACCCCCN

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCAACCCAAAGTCATCAAAAAAGACAAGGA
GGGGCACTTCATACTCATCAAAGGTAAAATCCTCCAAGATGAATTATCAA
TTCTGAATATCTATGCTACAACTACAAGGGCAGCCTCATTCATTAAAGAA
ACTTTAGTAAATTTCAAAGCACATATTGCACCTCACACAATAATAGTGGG
AGACTTCAACACACCACTTTCACCAATGGACAGATCATAGAAACAGAAAC
TAAATAGAAACACAGTGAAAACTAACAGAAGTTATGAAACAAATGGATCT
GACAAATATCTACAGAACATTTTATCCTAAAACAAAAGGCTATACTTTCT
TCCCAGCACCTCATGGTACCTTCTCTAAAGTTGACCACTTAATTGGTCAT
AAAAACAAGCCTCAACACAGACAAAAATATTGAAATGGTCCCATGCATCC
TATCAGATCACCATGGACTAACGCTGATCTTCAATAACAAAATAAATAAT
AGAAAGCCAACATTCACGTGGAAACTGAAAAACACTCTTCTCAATGATAC
CTTGGTCAAGGAAGAAATATAGAAAGAAATTACCGACTTTTTGGAGTTTA
ATAAAAATGAAGCCCCCAAATCCCCAAACCTATGGGCAATCATGAAAGCA
TTCTTAAGAGGAAAATTCTATTTCTGCG

Query= MSMg01no429_f23.b1 MSMg01no429_f23.b1 CHROMAT_FILE:
MSMg01no429_f23.b1 PHD_FILE: MSMg01no429_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:50 2005
         (495 letters)



>mm_chr5_40288430_40289324
          Length = 895

 Score =  934 bits (483), Expect = 0.0
 Identities = 489/491 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttctctgcctaatgaaatgtctcaccctgtttctttactatgtgagatatgaa 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcactgcctaatgaaatgtctcaccctgtttctttactatgtgagatatgaa 264

                                                                       
Query: 65  tgatttttggtatgccgagtattgtatattttacctatccattagtctcttggtagccat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatttttggtatgccgagtattgtatattttacctatccattagtctcttggtagccat 324

                                                                       
Query: 125 ctaagttatgtgttcctctaaggtttgcaatgcctttgttcacagaatgtgtatttatta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctaagttatgtgttcctctaaggtttgcaatgcctttgttcacagaatgtgtatttatta 384

                                                                       
Query: 185 aataactattctaccagaagcatagttgtggcagcaattaatatgtatccaaagaagtga 244
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 aataactattctaccagaagcatagttgtggcagtaattaatatgtatccaaagaagtga 444

                                                                       
Query: 245 aagcacacttgttttttgtcagaggtgaatatttgatagcttattatgttgtgactatgc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagcacacttgttttttgtcagaggtgaatatttgatagcttattatgttgtgactatgc 504

                                                                       
Query: 305 aacaaaaaccatgcacacgcaccttatctagtttgttacctctcgaaggtctctggaatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacaaaaaccatgcacacgcaccttatctagtttgttacctctcgaaggtctctggaatc 564

                                                                       
Query: 365 cattggcctgttgtcatgcaaccccaactctccatggataaagatgtgattcaatagttg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cattggcctgttgtcatgcaaccccaactctccatggataaagatgtgattcaatagttg 624

                                                                       
Query: 425 tgctaaaaaaggtgagcgaagttctcagaagcatagccacaccttggaacaattccttcc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgctaaaaaaggtgagcgaagttctcagaagcatagccacaccttggaacaattccttcc 684

                      
Query: 485 agaaaaaagtg 495
           |||||||||||
Sbjct: 685 agaaaaaagtg 695


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space:   429225
Effective search space used:   429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)