Query= MSMg01no430_o06.b1 MSMg01no430_o06.b1 CHROMAT_FILE:
MSMg01no430_o06.b1 PHD_FILE: MSMg01no430_o06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:58 2005
(430 letters)
>mm_chr5_102223769_102224598
Length = 830
Score = 803 bits (415), Expect = 0.0
Identities = 421/423 (99%)
Strand = Plus / Plus
Query: 6 gaattccttatttcgctttcctcagccattctgtattcttggaagctgcaatgatcacac 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccttatttcgatttcctcagccattctgtattcttggaagctgcaatgatcacac 265
Query: 66 aaataatgtaagctgttagataaagcccccttcttcctcagtaaagccgtatgcagtgct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaataatgtaagctgttagataaagcccccttcttcctcagtaaagccgtatgcagtgct 325
Query: 126 gactgagtgttcatgaagaccgcatcgaggcacttggtattttaaaagctctttgttctg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gactgagtgttcatgaagaccgcatcgaggcacttggtattttaaaagctctttgttctg 385
Query: 186 taaatggtttgtcttgttgccatgttgtcttaacactgaacattgtctccattctgtgat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taaatggtttgtcttgttgccatgttgtcttaacactgaacattgtctccattctgtgat 445
Query: 246 ttgtttcgtgaaaacaactttttatttcatatatacacagagcttatttgaagaatgacc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgtttcgtgaaaacaactttttatttcatatatacacagagcttatttgaagaatgacc 505
Query: 306 tttaaatagcctttgtttttataatacatgagtgacttttgttgccagcactccttatac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttaaatagcctttgtttttataatacatgagtgacttttgttgccagcactccttatac 565
Query: 366 ttggatacgatatatcttattgtgtggctttttcatagcatgcattattgtatgtattgg 425
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 566 ttggatacgatatatcttattgtgtggcgttttcatagcatgcattattgtatgtattgg 625
Query: 426 aat 428
|||
Sbjct: 626 aat 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_o06.g1 MSMg01no430_o06.g1 CHROMAT_FILE:
MSMg01no430_o06.g1 PHD_FILE: MSMg01no430_o06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:58 2005
(404 letters)
>mm_chr5_102425914_102426717
Length = 804
Score = 702 bits (363), Expect = 0.0
Identities = 387/395 (97%), Gaps = 1/395 (0%)
Strand = Plus / Minus
Query: 1 agcgcttagttccatacttagtaaggaacgggcaaagtcacttcccattgctgaagctcc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 394 agcgcttagttccatacttagtaaggagcgggcaaagtcacttcccattgctgaagctcc 335
Query: 61 ttttctcgggtagccatgcagattgcatgaggcaggcgtgttctcccgtgcttcctttcg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 334 ttttctcgggtagccatgcagattgcatgaggcaggcgtgttctcccgtgattcctttcg 275
Query: 121 taattacagagcctgctgtatctacgcatcacacagagagcagctgataaactggtctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 taattacagagcctgctgtatctacgcatcacacagagagcagctgataaactggtctta 215
Query: 181 agagtcttttacttgccaggcagtgatggcacacgcctttaatcccagcacttggtaggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 214 cgagtcttttacttgccaggcagtgatggcacacgcctttaatcccagcacttgggaggc 155
Query: 241 agaggctaggcagatttctgagttcgaggccagcctggtctacaaagtgagttccaggac 300
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 154 agaggc-aggcagatttctgagttcgaggccagcctggtctacaacgtgagttccaggac 96
Query: 301 agccagggctatacagagacaccctgtctcgaaaaacaaaaataaataataataaaaaaa 360
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 agccagggctatagagagaaaccctgtctcgaaaaacaaaaataaataataataaaaaaa 36
Query: 361 aataaagccttttactttatgatctcaagaatggc 395
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aataaagccttttactttatgatctcaagaatggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
