MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-430O20
Chromosome	5 (Build37)
Map Location	116,708,422 - 116,708,841
singlet/doublet	singlet
Overlap gene	Ccdc60
Upstream gene	Rnf10, Coq5, Dynll1, Sfrs9, 2010003O18Rik, Triap1, Cox6a1, Msi1, Pla2g1b, Sirt4, LOC638021, Pxn, Arbp, Gcn1l1, LOC100042199, Rab35, Ccdc64, LOC665032, Cit, Prkab1, LOC545798
Downstream gene	4930562A09Rik, Hspb8, 1500001A10Rik, LOC433943, Gm1684, LOC665073, Suds3, Taok3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rnf10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50849 MGI:1859162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Coq5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52064 MGI:1098643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dynll1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56455 MGI:1861457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108014 MGI:104896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010003O18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384281 MGI:1923776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Triap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69076 MGI:1916326
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cox6a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12861 MGI:103099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Msi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17690 MGI:107376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18778 MGI:101842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sirt4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75387 MGI:1922637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 59 ESTs, 7 Proteins

name	LOC638021 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:638021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Pxn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19303 MGI:108295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Arbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11837 MGI:88066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gcn1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231659 MGI:2444248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042199 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs

name	Rab35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77407 MGI:1924657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc64 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75665 MGI:1922915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665032 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 961 ESTs, 5 Proteins

name	Cit (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12704 MGI:105313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19079 MGI:1336167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545798 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ccdc60 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269693 MGI:2141043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930562A09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75303 MGI:1922553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	Hspb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80888 MGI:2135756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1500001A10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68955 MGI:1916205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433943 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 134 ESTs, 20 Proteins pseudo : _no_value

name	Gm1684 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381709 MGI:2686530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC665073 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 1 Protein pseudo : _no_value

name	Suds3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71954 MGI:1919204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Taok3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330177 MGI:3041177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7710089 GeneID:50849 MGI:1859162
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 10 transcript_id : NM_016698.1

name	Coq5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378282 GeneID:52064 MGI:1098643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coenzyme Q5 homolog, methyltransferase (yeast) transcript_id : NM_026504.2

name	Dynll1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358000 GeneID:56455 MGI:1861457
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein light chain LC8-type 1 transcript_id : NM_019682.3

name	Sfrs9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130304 GeneID:108014 MGI:104896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine rich 9 transcript_id : NM_025573.3

name	2010003O18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388151 GeneID:384281 MGI:1923776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010003O18 gene transcript_id : NM_029645.3

name	Triap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344163 GeneID:69076 MGI:1916326
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TP53 regulated inhibitor of apoptosis 1 transcript_id : NM_026933.2

name	Cox6a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131168 GeneID:12861 MGI:103099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase, subunit VI a, polypeptide 1 transcript_id : NM_007748.3

name	Msi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678939 GeneID:17690 MGI:107376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Musashi homolog 1(Drosophila) transcript_id : NM_008629.1

name	Pla2g1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755089 GeneID:18778 MGI:101842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IB, pancreas transcript_id : NM_011107.1

name	Sirt4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254537 GeneID:75387 MGI:1922637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 59 ESTs, 7 Proteins product : sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae) transcript_id : XM_485674.5

name	Pxn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326501 GeneID:19303 MGI:108295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paxillin transcript_id : NM_133915.2

name	Pxn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326500 GeneID:19303 MGI:108295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paxillin transcript_id : NM_011223.2

name	Arbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372948 GeneID:11837 MGI:88066
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acidic ribosomal phosphoprotein P0 transcript_id : NM_007475.3

name	Gcn1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112807185 GeneID:231659 MGI:2444248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GCN1 general control of amino-acid synthesis 1-like 1 (yeast) transcript_id : NM_172719.2

name	LOC100042199 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254569 GeneID:100042199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs product : hypothetical protein LOC100042199 transcript_id : XM_001478983.1

name	Rab35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37718982 GeneID:77407 MGI:1924657
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB35, member RAS oncogene family transcript_id : NM_198163.1

name	Ccdc64 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248513 GeneID:75665 MGI:1922915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 64 transcript_id : NM_001080808.1

name	LOC665032 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94375577 GeneID:665032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 960 ESTs, 5 Proteins product : similar to ribosomal protein transcript_id : XM_974069.1

name	Cit (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487318 GeneID:12704 MGI:105313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : citron transcript_id : NM_007708.3

name	Prkab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130748 GeneID:19079 MGI:1336167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, AMP-activated, beta 1 non-catalytic subunit transcript_id : NM_031869.2

name	LOC545798 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94375579 GeneID:545798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to MGC79481 protein transcript_id : XM_620250.3

name	Ccdc60 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802445 GeneID:269693 MGI:2141043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 60 transcript_id : NM_177759.3

name	Hspb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892223 GeneID:80888 MGI:2135756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 8 transcript_id : NM_030704.2

name	1500001A10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126215551 GeneID:68955 MGI:1916205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1500001A10 gene transcript_id : NM_026886.3

name	Gm1684 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254539 GeneID:381709 MGI:2686530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : gene model 1684, (NCBI) transcript_id : XM_001472646.1

name	Suds3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581562 GeneID:71954 MGI:1919204
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of defective silencing 3 homolog (S. cerevisiae) transcript_id : NM_178622.3

name	Taok3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486800 GeneID:330177 MGI:3041177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAO kinase 3 transcript_id : NM_001081308.1

name	Rnf10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710090 CCDS:CCDS19584.1 GeneID:50849 MGI:1859162
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ring finger protein 10 protein_id : NP_057907.1

name	Coq5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385992 CCDS:CCDS19585.1 GeneID:52064 MGI:1098643
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006744 - ubiquinone biosynthesis [Evidence IEA] codon_start : 1 product : coenzyme Q5 homolog, methyltransferase protein_id : NP_080780.1

name	Dynll1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981035 GeneID:56455 MGI:1861457
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0004857 - enzyme inhibitor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007018 - microtubule-based movement [Evidence TAS]; GO:0045019 - negative regulation of nitric oxide biosynthesis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : protein inhibitor of nitric oxide synthase; 8kD LC; 8kDa LC; dynein, cytoplasmic, light chain 1 product : dynein, cytoplasmic, light peptide protein_id : NP_062656.2

name	Sfrs9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385016 CCDS:CCDS19587.1 GeneID:108014 MGI:104896
definition	GO_component : GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006376 - mRNA splice site selection [Evidence IEA] codon_start : 1 note : splicing factor, arginine/serine rich 9 (25 kDa) product : splicing factor, arginine/serine rich 9 protein_id : NP_079849.1

name	2010003O18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059159 CCDS:CCDS19588.1 GeneID:384281 MGI:1923776
definition	GO_function : GO:0017068 - glutamyl-tRNA(Gln) amidotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006450 - regulation of translational fidelity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC384281 protein_id : NP_083921.1

name	Triap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312202 GeneID:69076 MGI:1916326
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0043027 - caspase inhibitor activity [Evidence ISS] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0006915 - apoptosis [Evidence IEA]; GO:0006977 - DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest [Evidence ISS] codon_start : 1 product : p53-inducible cell-survival factor protein_id : NP_081209.1

name	Cox6a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680988 CCDS:CCDS19590.1 GeneID:12861 MGI:103099
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005740 - mitochondrial envelope [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : subunit VIaL (liver-type) product : cytochrome c oxidase, subunit VI a, polypeptide 1 protein_id : NP_031774.1

name	Msi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678940 CCDS:CCDS19591.1 GeneID:17690 MGI:107376
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005844 - polysome [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008266 - poly(U) binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003727 - single-stranded RNA binding [Evidence IDA] codon_start : 1 product : Musashi homolog 1 protein_id : NP_032655.1

name	Pla2g1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755090 CCDS:CCDS19592.1 GeneID:18778 MGI:101842
definition	GO_component : GO:0005576 - extracellular region [Evidence TAS] [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IDA] GO_process : GO:0008283 - cell proliferation [Evidence TAS]; GO:0016042 - lipid catabolism [Evidence IEA]; GO:0009395 - phospholipid catabolism [Evidence TAS]; GO:0006644 - phospholipid metabolism [Evidence IEA]; GO:0006950 - response to stress [Evidence TAS] codon_start : 1 product : phospholipase A2, group IB, pancreas protein_id : NP_035237.1

name	Sirt4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254538 GeneID:75387 MGI:1922637
definition	codon_start : 1 product : sirtuin 4 (silent mating type information regulation 2 homolog) 4 protein_id : XP_485674.5

name	Pxn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326502 GeneID:19303 MGI:108295
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005925 - focal adhesion [Evidence IDA] [Evidence TAS]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030159 - receptor signaling complex scaffold activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0048754 - branching morphogenesis of a tube [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0006928 - cell motility [Evidence IMP]; GO:0007160 - cell-matrix adhesion [Evidence IEA]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IMP]; GO:0048041 - focal adhesion formation [Evidence IDA]; GO:0007229 - integrin-mediated signaling pathway [Evidence TAS] [Evidence IMP]; GO:0030032 - lamellipodium biogenesis [Evidence IDA] codon_start : 1 note : isoform beta is encoded by transcript variant beta product : paxillin isoform beta protein_id : NP_598676.2

name	Pxn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21281693 CCDS:CCDS19593.1 GeneID:19303 MGI:108295
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005925 - focal adhesion [Evidence IDA] [Evidence TAS]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030159 - receptor signaling complex scaffold activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0048754 - branching morphogenesis of a tube [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0006928 - cell motility [Evidence IMP]; GO:0007160 - cell-matrix adhesion [Evidence IEA]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IMP]; GO:0048041 - focal adhesion formation [Evidence IDA]; GO:0007229 - integrin-mediated signaling pathway [Evidence TAS] [Evidence IMP]; GO:0030032 - lamellipodium biogenesis [Evidence IDA] codon_start : 1 note : isoform alpha is encoded by transcript variant alpha product : paxillin isoform alpha protein_id : NP_035353.1

name	Arbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671569 CCDS:CCDS19594.1 GeneID:11837 MGI:88066
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0042254 - ribosome biogenesis and assembly [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA] codon_start : 1 product : acidic ribosomal phosphoprotein P0 protein_id : NP_031501.1

name	Gcn1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112807186 CCDS:CCDS19595.1 GeneID:231659 MGI:2444248
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : GCN1 general control of amino-acid synthesis 1-like 1 protein_id : NP_766307.2

name	LOC100042199 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254570 GeneID:100042199
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479033.1

name	Rab35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37718983 CCDS:CCDS19596.1 GeneID:77407 MGI:1924657
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB35, member RAS oncogene family protein_id : NP_937806.1

name	Ccdc64 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248514 GeneID:75665 MGI:1922915
definition	codon_start : 1 product : coiled-coil domain containing 64 protein_id : NP_001074277.1

name	LOC665032 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94375578 GeneID:665032
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_979163.1

name	Cit (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487319 CCDS:CCDS19597.1 GeneID:12704 MGI:105313
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IDA] [Evidence IEA]; GO:0001726 - ruffle [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0005083 - small GTPase regulator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IMP]; GO:0016358 - dendrite development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0048699 - generation of neurons [Evidence IMP] [Evidence IDA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0007091 - mitotic metaphase/anaphase transition [Evidence IMP]; GO:0000070 - mitotic sister chromatid segregation [Evidence IMP]; GO:0050774 - negative regulation of dendrite morphogenesis [Evidence IDA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : citron kinase; citron-N product : citron protein_id : NP_031734.3

name	Prkab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956234 CCDS:CCDS19598.1 GeneID:19079 MGI:1336167
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004679 - AMP-activated protein kinase activity [Evidence TAS]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006950 - response to stress [Evidence TAS] codon_start : 1 product : AMP-activated protein kinase beta 1 non-catalytic subunit protein_id : NP_114075.1

name	LOC545798 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:63533863 GeneID:545798
definition	codon_start : 1 product : similar to MGC79481 protein protein_id : XP_620250.1

name	Ccdc60 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244264 CCDS:CCDS19599.1 GeneID:269693 MGI:2141043
definition	codon_start : 1 product : coiled-coil domain containing 60 protein_id : NP_808427.1

name	Hspb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507646 CCDS:CCDS19600.1 GeneID:80888 MGI:2135756
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : crystallin, alpha C; heat shock 27kDa protein 8 product : heat shock protein 20-like protein protein_id : NP_109629.1

name	1500001A10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794434 CCDS:CCDS19601.1 GeneID:68955 MGI:1916205
definition	codon_start : 1 product : hypothetical protein LOC68955 protein_id : NP_081162.1

name	Gm1684 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254540 GeneID:381709 MGI:2686530
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472696.1

name	Suds3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559849 GeneID:71954 MGI:1919204
definition	GO_component : GO:0016580 - Sin3 complex [Evidence IDA] GO_function : GO:0042826 - histone deacetylase binding [Evidence IDA]; GO:0042802 - identical protein binding [Evidence IPI] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RIKEN cDNA 2400003N08 protein_id : NP_848737.2

name	Taok3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486801 GeneID:330177 MGI:3041177
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 product : TAO kinase 3 protein_id : NP_001074777.1

name	LOC638021 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638021
definition	number : 1 pseudo : _no_value

name	4930562A09Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254571 GeneID:75303 MGI:1922553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : RIKEN cDNA 4930562A09 gene transcript_id : XR_035352.1

name	LOC433943 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254572 GeneID:433943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 134 ESTs, 20 Proteins product : similar to Glutathione S-transferase Mu 1 (GST class-mu 1) (Glutathione S-transferase GT8.7) (pmGT10) (GST 1-1) pseudo : _no_value transcript_id : XR_034042.1

name	LOC665073 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254541 GeneID:665073
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 1 Protein product : similar to ubiquitin-conjugating enzyme E2E 1 pseudo : _no_value transcript_id : XR_030833.1

clone name	MSMg01-315K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-456K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184M16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-430O20.T7 (MSMg01no430_o20.b1)	MSMg01-430O20.TJ (MSMg01no430_o20.g1)
ACC	AG523304	AG523305
length	821	784
length of high quality (start - end)	423 (47 - 469)	324 (78 - 401)
definition	CHROMAT_FILE: MSMg01no430_o20.b1 PHD_FILE: MSMg01no430_o20.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:54:01 2005	CHROMAT_FILE: MSMg01no430_o20.g1 PHD_FILE: MSMg01no430_o20.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:54:01 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NTTCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG GAATTCTCTAGAGTATCTCAACCACTGATTCTTTTCTCTCAAAGACTTGG CACCATACGGGCTTGACCTTCCAGAGGAGAGAGGCTTCTGCAAGATGCCT GATGGGTAATGGCAGCAGTGGGCATGGACTGTGGCATAATTGCATTCCGC CTGTCTCCTACATTTTTCTGGGTTGGGCACCATTTGTTTCAAAGCTCCTG TCGTGTGGCCATTAAATCACCGTTTGCTCTGACAGTGTCATTTCTGTAAC ACCCTGGAGGGAGCAGGCTGCATTGTCTCTGGATCTGGAACGCTGCCATT TGGTCATCATACTTTCTCCAAAGGCGCTCCTTGGATGCGGCTGAACGAGG GTCCCCCAGATACACTGCTCCTGGAGCCCACCAGTGCTCTGTGCATTTGC AAAGTGGAATTATCCTGGCTGGGGAGAGTGCCCCCTAGGACTGATTTATG AGATTAGCTCTGGCAGATGGGTGAAAAAAAAACAAGAAGGTCGGGAAAAT ATCTATCCCCCCCCCTTTCCAAAAGGGTGCTTCCCTTTTTGGTTGGAGTT GTGAACTTTTTTTTTTTCCTTCAGTGTCCTATTTTATCAATTATTCCTTA TAACGATATTGTTTTTTTTTTCCCTCTATTCTCTCTTCTTTTTCTCAAAA TCTTACCCATAAATACCTTTTTTTGCTCTCCTTTCCTTTTCCTATTTTTC CTCTTTCCTCCTATCTGCTGCTACCAATAATCCTGATCCTTCTAATACCC ATTACCCTACACTCACCAAAN	NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTGCTGTGATCAAACGTCCCA ACAACAACAACAACAACAACACAACCTCGGGTTTATCCTAGCTCACAGTC CCAGGTTATAGGCCATCACTGTGAGGAAGCCACAGTAGTGGGAGCTTAAG GTAGTGGCTATATCATATCCACAGTCAAGAGCAGGGAGAAATTAATGCAT GCATAGCATTATGCTTGATTATTTACACGAAGGTCAGTTTCTCCGTCACA TAGAGTTGGGGACCCTCTGCGTATGTTATGGTGCTGTTCATAGTGGGTGG GGTCTTCCCACACCAATTAACTTCAGACAACCCTCTACAGATATACCCAA AGCAGGCTCAGTGTAGATAATTCAATTACACATTGACATTCGCTTTCTAG GTGATTCTAGAGTCTACTAAGTTGACTATTAATGCTGACCCTCTGTATGG TTGTCTTGACTTGTATGAAATTTCCTTCCTCACTTATCCTTATTTACTTC CCTCCTCTTCTTTTCTGATATTTCGTTCTTTATTACCCTTTACGCAAATT CTCTTCCTTAGTTCCTTCCCTTCTTCTCGCCCCCTTTATCCTCTCCCTTT CTCTCTTTCCCTTCCCTCTTCTTTTTTTTTTCCGTCGGCCTCCCCCTTCT TCCTTAATTTCTCCCTACGTTTTTTTCTTCTTTTCCCCTTTATCCCATTT TTACCCCTCCTTTCTATTTTTTTCGCTCCCTCTT
quality values	Open. Hide. 0 3 7 7 8 8 8 8 8 10 19 23 29 19 21 10 10 18 23 29 30 31 31 31 48 48 26 23 17 15 16 19 27 11 11 9 16 11 10 10 15 10 11 18 24 28 31 59 48 48 36 36 36 36 50 50 59 59 59 41 21 8 10 10 8 8 8 8 10 21 23 36 41 41 41 42 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 59 59 59 59 59 57 57 68 68 68 68 68 57 57 57 57 57 50 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 48 48 48 50 68 50 50 50 50 50 50 57 59 52 52 52 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 68 68 59 59 59 54 54 54 57 59 57 54 54 57 59 59 59 59 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 68 68 68 59 59 59 57 57 57 57 48 53 57 57 48 57 48 57 48 57 48 48 48 48 47 47 59 30 30 18 13 13 13 19 19 32 32 41 41 47 48 48 48 50 57 59 57 57 57 57 57 57 59 48 48 59 59 59 59 57 46 43 57 43 48 48 57 59 54 24 21 9 9 9 21 21 44 30 30 30 44 44 54 54 54 57 46 57 48 43 43 44 43 48 48 46 43 43 42 47 35 42 39 57 43 48 48 48 48 57 57 57 59 59 59 43 37 37 28 28 28 32 32 28 34 28 36 39 59 43 41 31 25 30 28 18 21 24 25 28 32 28 32 39 26 30 18 26 19 12 12 16 16 28 32 34 27 26 17 16 14 21 13 13 18 21 32 32 32 30 32 28 25 14 11 8 10 10 13 12 13 14 14 16 24 24 23 23 23 17 15 9 8 8 8 9 9 10 9 9 9 9 12 11 15 13 10 8 8 10 10 16 23 23 11 11 12 18 23 14 11 9 16 15 9 9 10 10 11 12 16 15 18 14 8 8 8 8 8 11 11 8 8 8 6 9 9 9 8 10 10 8 10 10 10 8 11 8 8 8 8 10 10 10 10 9 10 10 10 11 17 12 12 9 14 14 13 14 14 10 11 9 9 9 9 10 10 12 16 13 12 8 9 8 9 10 10 10 12 8 6 6 6 6 8 8 8 8 8 7 6 6 8 8 8 10 8 8 10 10 9 10 10 19 15 28 18 18 11 8 8 6 6 6 8 8 8 10 7 9 10 11 8 8 8 8 6 6 6 6 8 8 10 12 10 8 10 8 8 6 6 9 9 8 8 8 8 8 8 15 19 22 15 18 20 21 21 10 8 8 8 10 8 13 8 8 8 8 10 8 9 8 8 10 10 10 13 13 14 8 9 8 8 8 8 8 9 9 12 10 10 13 13 10 10 18 22 12 12 11 8 8 8 8 8 10 13 15 13 8 8 8 8 8 8 8 9 8 8 8 8 10 8 9 10 10 12 15 13 13 8 8 8 8 10 9 9 13 12 17 10 8 10 10 16 18 12 12 12 11 8 8 8 8 8 8 8 11 9 9 7 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 12 10 8 8 8 8 8 8 6 6 6 8 8 9 8 8 8 10 12 10 8 6 6 8 8 9 10 10 11 12 10 10 3 0	Open. Hide. 0 3 7 7 17 13 10 9 9 8 9 9 9 9 18 16 30 29 32 32 37 39 39 39 39 37 31 31 37 32 32 25 25 11 9 9 11 11 9 15 13 17 17 28 29 40 43 48 48 36 38 38 36 36 36 44 44 40 40 40 41 25 19 9 9 9 9 9 18 18 27 21 28 28 28 28 35 48 50 50 57 57 57 57 57 42 47 47 47 40 50 50 57 57 57 68 53 51 48 48 48 42 42 42 42 47 47 47 47 47 47 47 47 50 50 50 50 57 57 57 43 43 43 43 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 50 51 51 50 50 50 57 59 57 57 57 54 54 57 57 57 51 50 50 50 50 57 57 57 59 59 68 68 68 68 68 68 68 68 59 57 57 57 57 38 34 19 11 11 24 34 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 52 46 50 59 59 68 68 50 50 50 50 48 50 50 50 50 47 57 57 57 57 57 57 59 59 68 59 59 59 54 54 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 54 54 54 57 57 57 59 59 48 48 48 59 59 68 68 68 68 68 68 59 57 57 57 57 57 57 59 59 59 59 59 59 59 50 47 50 47 53 41 50 50 50 59 59 26 15 8 8 8 8 8 8 10 10 12 15 25 25 41 41 43 43 43 43 48 48 48 48 48 48 59 57 57 57 48 43 43 43 48 48 44 43 37 31 23 20 20 20 31 31 40 36 30 30 39 32 37 28 23 23 25 28 30 35 42 44 46 42 43 28 28 20 20 20 36 36 42 48 42 34 21 13 13 13 19 24 20 18 19 12 12 11 11 11 12 12 18 18 11 21 21 21 21 25 22 24 11 11 11 18 23 23 12 11 11 11 18 25 18 18 14 26 26 32 24 20 20 24 15 15 15 19 15 15 17 15 20 21 23 21 8 8 8 8 8 8 8 8 12 6 6 8 8 9 15 15 22 13 13 12 11 11 12 15 11 11 11 11 12 13 13 15 15 18 18 15 20 10 10 9 10 10 10 10 12 12 11 11 11 18 15 15 10 8 8 6 6 10 8 8 8 8 10 10 10 12 14 14 13 13 8 8 8 10 9 9 10 15 8 8 8 8 8 8 8 8 8 10 10 13 9 10 10 8 8 10 8 8 6 6 8 8 10 11 12 10 8 6 8 6 7 8 8 8 8 12 9 9 9 10 10 13 8 8 8 8 8 8 9 9 9 10 13 11 11 9 9 9 9 9 9 19 18 16 11 11 11 12 11 11 8 10 8 8 8 8 9 9 8 8 8 10 10 10 14 14 14 13 8 8 8 8 8 8 13 8 10 10 10 10 11 14 10 10 10 8 8 8 9 9 9 11 8 12 12 10 10 8 10 8 8 8 10 10 15 19 22 12 7 6 6 8 8 9 9 10 10 12 12 12 12 16 10 12 6 8 6 8 8 6 6 8 8 11 10 10 10 13 13 15 15 15 15 19 14 18 10 12 9 12 8 8 10 10 8 8 8 11 12 12 11 11 11 11 10 10 10 20 15 16 14 12 14 14 19 19 19 10 10 8 8 8 10 10 10 10 10 10 12 12 12 12 15 15 10 9 13 13 10 12 18 20 20 13 12 8 8 8 8 6 6 10 8 10 10 8 8 8 8 8 10 10 9 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no430_o20.b1 MSMg01no430_o20.b1 CHROMAT_FILE:
MSMg01no430_o20.b1 PHD_FILE: MSMg01no430_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:01 2005
         (423 letters)



>mm_chr5_116708218_116709041
          Length = 824

 Score =  774 bits (400), Expect = 0.0
 Identities = 415/422 (98%), Gaps = 5/422 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctagag---tatctcaaccactgattcttttctctcaaagacttggcaccata 61
           |||||||||||||   ||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctagaggattatc--aaccactgattcttttctctcaaagacttggcaccata 262

                                                                       
Query: 62  cgggcttgaccttccagaggagagaggcttctgcaagatgcctgatgggtaatggcagca 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgggcttgaccttccagaggagagaggcttctgcaagatgcctgatgggtaatggcagca 322

                                                                       
Query: 122 gtgggcatggactgtggcataattgcattccgcctgtctcctacatttttctgggttggg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtgggcatggactgtggcataattgcattccgcctgtctcctacatttttctgggttggg 382

                                                                       
Query: 182 caccatttgtttcaaagctcctgtcgtgtggccattaaatcaccgtttgctctgacagtg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caccatttgtttcaaagctcctgtcgtgtggccattaaatcaccgtttgctctgacagtg 442

                                                                       
Query: 242 tcatttctgtaacaccctggagggagcaggctgcattgtctctggatctggaacgctgcc 301
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 tcatttctgtaacaccctggagggagcaggctgcactgtctctggatctggaacgctgcc 502

                                                                       
Query: 302 atttggtcatcatactttctccaaaggcgctccttggatgcggctgaacgagggtccccc 361
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atttggtcatcatactgtctccaaaggcgctccttggatgcggctgaacgagggtccccc 562

                                                                       
Query: 362 agatacactgctcctggagcccaccagtgctctgtgcatttgcaaagtggaattatcctg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agatacactgctcctggagcccaccagtgctctgtgcatttgcaaagtggaattatcctg 622

             
Query: 422 gc 423
           ||
Sbjct: 623 gc 624


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space:   337410
Effective search space used:   337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information