Query= MSMg01no431_c07.b1 MSMg01no431_c07.b1 CHROMAT_FILE:
MSMg01no431_c07.b1 PHD_FILE: MSMg01no431_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:19 2005
(465 letters)
>mm_chr5_15183446_15184310
Length = 865
Score = 571 bits (295), Expect = e-167
Identities = 355/381 (93%), Gaps = 15/381 (3%)
Strand = Plus / Plus
Query: 88 ttaattgatgtgataagccaaggcatagctcaacctgggcacttacatcctgggtggctg 147
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 297 ttaattgatgtgataagtcaaggcatagctcaaactgggcacttacatcctgggtggctg 356
Query: 148 ggcctggataaaaaataaaaaacaaaacaaaaacaaaaaaaaaacagaaaacaaaaccaa 207
||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||
Sbjct: 357 ggcctggataaaaaacaaaaaacaaaacaaaaa------aaaaaca--aaacaaaa--aa 406
Query: 208 a-aaaaaattatctgagaactatccaattaagtggaacctct--cttgggtctctttttc 264
| ||||||||||||||||||||||||| |||| ||||||||| | |||||||||||||
Sbjct: 407 acaaaaaattatctgagaactatccaactaagaggaacctctggc--gggtctctttttc 464
Query: 265 agttcctgccacatatattctttcctgtgccaatatgctttgggtcagtgtcttagcaga 324
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 agttcctgccacataaattctttcctgtgccaatatgctttgggtcagtgtcttagcaga 524
Query: 325 acaagagagacaaagggcataactaagaaatctcagctccatgaaaacacacctaaggtc 384
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 525 acaagagagacagagggcatcactaagaaatctcagctccatgaaaacacacctaaggtc 584
Query: 385 actaagcctcagcatctgctcttcccagttacgctgccttgaataaaactttcttactcc 444
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 585 actaagcctcagcatctgctcttcccagataagctgccttgaataaaactttcttactcc 644
Query: 445 tctcatttagtcgtcagaatg 465
|||| ||||||||||||||||
Sbjct: 645 tctcctttagtcgtcagaatg 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_c07.g1 MSMg01no431_c07.g1 CHROMAT_FILE:
MSMg01no431_c07.g1 PHD_FILE: MSMg01no431_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:19 2005
(408 letters)
>mm_chr5_15112473_15113280
Length = 808
Score = 650 bits (336), Expect = 0.0
Identities = 390/408 (95%)
Strand = Plus / Plus
Query: 1 ctcttctcaggtacaactgggtctttgtcaagttgataaaatgcaagaaacatatcgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttctcaggtacaactgggtctttgtcaagttgataaaatgcaagaaacatatcgtgc 260
Query: 61 aaatgaaacggaagcagctttgaaagtctgagtagccggtgggcatccctgcacatgtgc 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgaaacggaagcagcattgaaagtctgagtagccggtgggcatccctgcacatgtgc 320
Query: 121 ctgtgggtagctgacagatcagctggtttaaaagcaaagctggtggtctagtcaatcatg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ctgtgggtagctgacagatcagctggtttaaaagcaaggctggtggtctagtcaatcatg 380
Query: 181 gtctatgttctggtgctaagccagattctggagaaagctctattgttgttaagacttgag 240
||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcgctgttctagtgctaaaccagattctggagaaagctctattgttgttaagacttgag 440
Query: 241 aggaacttggtgtttgattatgggatggatccccgggtggggtagtctctggatggtcca 300
|||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 aggagcttggtggctgattatgggatggatcatcgggtggggtagtctctggatggtcca 500
Query: 301 tcctttcgtcttagctttgtctccgtaattccatccatgggaattttgctccctattctg 360
||||||| |||||||||||||||||||| ||| ||||||| ||||| |||||||||||
Sbjct: 501 tcctttcttcttagctttgtctccgtaactccttccatggcttttttgttccctattctg 560
Query: 361 acactactgcatatgccagcaagattttgctgaaaggaccttgatata 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acactactgcatatgccagcaagattttgctgaaaggaccttgatata 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
