Query= MSMg01no432_a16.b1 MSMg01no432_a16.b1 CHROMAT_FILE:
MSMg01no432_a16.b1 PHD_FILE: MSMg01no432_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:37 2005
(429 letters)
>mm_chr5_67680871_67681698
Length = 828
Score = 777 bits (402), Expect = 0.0
Identities = 420/426 (98%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 4 ggaattccctggatcatgcaagttcaacactggcaatgtgttggtgtagctcaacaggca 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctggatcagggaagttcaacactggcaatgtgttggtgtagctcaacaggca 263
Query: 64 ctacatagctttggaagcccggagttgtttctcagcagctccttaatgcacatggtcttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctacatagctttggaagcccggagttgtttctcagcagctccttaatgcacatggtcttt 323
Query: 124 catagtttgactgcaaagccattcttggagctggtgtctatcaaagataatcaaaggagc 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 324 catagtttgactgcaaagccattcttggagctggtgtctatcaaagata-tcaaaggagc 382
Query: 184 tgctgggaatttgaaaggtttcctgtaattagttaatcagtgtgaattttgcgatttttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 383 tgctgggaatttgaaaggtttcctgtaattagttaatcagtgtgaattttgtgatttttg 442
Query: 244 agatggcacttaggtggcccattcagaatggatggaatcttgggtaaaggcttctctctg 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 443 agatggcacttaggtggcccattcagaatggatggaatctcgggtaaaggcttctctctg 502
Query: 304 tggccttctctttgtgatgcgcatgccttgtacccagcccacactgagtgtgagtcagta 363
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 503 tggccttctctttgtgatgcgcatgccatgtacccagcccacactgagtgtgagtcagta 562
Query: 364 gtgacagacagcatgcagtaagtattctctgtatctcaagtggctctttcttagaaaacc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtgacagacagcatgcagtaagtattctctgtatctcaagtggctctttcttagaaaacc 622
Query: 424 atagga 429
||||||
Sbjct: 623 atagga 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 828
Length adjustment: 9
Effective length of query: 420
Effective length of database: 819
Effective search space: 343980
Effective search space used: 343980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_a16.g1 MSMg01no432_a16.g1 CHROMAT_FILE:
MSMg01no432_a16.g1 PHD_FILE: MSMg01no432_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:37 2005
(246 letters)
>mm_chr5_67876144_67876789
Length = 646
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Minus
Query: 1 tttctttcttttattctctctttgagcttatttggtgacagttagccatcattaatacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttctttcttttattctctctttgagcttatttggtgacagttagccatcattaatacac 386
Query: 61 aaggctgtggtttgaatgtgatcaccaaagctttcgagttgaaaacttagctcccagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaggctgtggtttgaatgtgatcaccaaagctttcgagttgaaaacttagctcccagtgt 326
Query: 121 tttgagagactgagctttgtaaagggtggttgggtggtgagaacagagttctggcctggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgagagactgagctttgtaaagggtggttgggtggtgagaacagagttctggcctggt 266
Query: 181 aaatggcctgaggtcatcactgtgagggtgggctagctatctccaaagtaggactgtccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatggcctgaggtcatcactgtgagggtgggctagctatctccaaagtaggactgtccc 206
Query: 241 aaaag 245
|||||
Sbjct: 205 aaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
