CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGGATCCGCGGAATTC
CAGGGGACATTCCCCCAGCGTCTCCCACAAGGTCTGCTGTGCACGGCAGG
TGCAGAAAATATCAGTAACCAAGCAAATGAATAAGATGATGGTTTGTGAG
CCTTAAAGAGTCCCCCACGAACCTCATGGTCTCACCTCCTACCGGACCTT
CCACCCCTGGAGGGCAAACCCACCTCATAAACCACATGACATCCCCATCA
TTGGAGGCTCTCAGGACAAATGTGAACCTCAGATCCTCGCTTCTGAGACA
GGGATATATTCTATGTGTCCCGTCCCGCCCCATACTAGAATACCCACAAA
CCAGGATGACTCTCACCTTTGGGACATGGGCATCCCATTGTGGAAGGACC
TTGACTACTGAAGAGACCTTCTTTAGAACGTCTCTGAATCTGTCTGTCTC
CATCTGCCTACCATTTAGCTTGGTTTTAGCCCAGCTTAATTATTATTGCC
AACTCCCCTTTTTGACACCGGAGACCCTTGGGGTACATTCACCTGGGCTT
GCGGTTTCCCCCACAAGGGATTATACCCTTCCTCCCAGGGGACCCCCCCC
CCCTTTTATTTCCCCTTTTTTTGTTAATTACCCTTTTGTTTTTTTTTCCT
CCTTTCTTTTTTCTTTAACCTTCTTTTTTTCCCCCCCCCTTCTCTCTCTA
TTGCGTAATTTGTATTTCCTCTCGCCTGCGATTCTCTTCTTCCCCCCTGT
CGCCTAGCATTTTTTTTCTCCCCTCTTTTTCTTT

TGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCACTCTCTCTTCTTAGAAGGTGTGAGACAGGGACC
TGGCCCCCACTGCATACCTCATGGTGACTGGGTGGCAGATCTGGGTCCCA
GCACTAGTTCTGAGATCGACCTTCCTCCCTTTTGGGGTCAGGAACTGGAA
TGGTGCCAGGTTTCTGGACTTGGCCAGGAAGGCAGTATAAGTTCGGACCC
ACAGCCAACAACCTACGGAGAAGAATTGTGGAGTTGGGGCATGACTTCAG
GGGTTTTGCTCATTCTTGGATGGGAGAGCATCACAGAGCAAAGAGTAGCA
CCCATCATGGAAGCTAGGGAGCAGAGAGGGGCTAGGAGAGGGAAGACAGG
AGAAGAGAAGAGGAGCCCAGGATGTTTGTACTGTGGGCTCTCTTCATCCT
GTCCGTTATGGTATGGTGCTGCCCACATTTAAGCCCAATCTTCTCTTTCC
ACCCCTGACACCTCCTCCCTCATTAGTTACCTTCCCCTGGTAATCCCTTT
CCGGATCCCCTCCCTCTGCCTGCGCAAAGGTCTTCCAGGCTGGTCCCCCC
AAGGTCCCCTATATCCCAGTCCATTTGCGTCTTTCCCTTCTTTCCTTTTT
TCCTCCCCCCCTTTTTCTTTCCCTTTCCGTTCCGCCACCTTTTCGCTTTC
TCTTTTCCCCTTCTCTTCCGCCTTTTCTCCTATTCTCTTTCCTTTCCCCC
TTTTTCCCTTTATCGTTTTCCCTTN

Query= MSMg01no433_i22.b1 MSMg01no433_i22.b1 CHROMAT_FILE:
MSMg01no433_i22.b1 PHD_FILE: MSMg01no433_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:41 2005
         (373 letters)



>mm_chr5_119676995_119677767
          Length = 773

 Score =  683 bits (353), Expect = 0.0
 Identities = 368/373 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctcccacaaggtctgctgtgcacggcaggtgcagaaaatatcagtaaccaagcaaatga 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcccacgaggtctgctgtgcacggcaggtgcagaaaatatcagtaaccaagcaaatga 260

                                                                       
Query: 61  ataagatgatggtttgtgagccttaaagagtcccccacgaacctcatggtctcacctcct 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ataagatgatggtttgtgagccttaacgagtcccccacgaacctcatggtctcacctcct 320

                                                                       
Query: 121 accggaccttccacccctggagggcaaacccacctcataaaccacatgacatccccatca 180
           || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 acgggaccttccacccctggagggaaaacccacctcataaaccacatgacatccccatca 380

                                                                       
Query: 181 ttggaggctctcaggacaaatgtgaacctcagatcctcgcttctgagacagggatatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggaggctctcaggacaaatgtgaacctcagatcctcgcttctgagacagggatatatt 440

                                                                       
Query: 241 ctatgtgtcccgtcccgccccatactagaatacccacaaaccaggatgactctcaccttt 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatgtgtcccgccccgccccatactagaatacccacaaaccaggatgactctcaccttt 500

                                                                       
Query: 301 gggacatgggcatcccattgtggaaggaccttgactactgaagagaccttctttagaacg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggacatgggcatcccattgtggaaggaccttgactactgaagagaccttctttagaacg 560

                        
Query: 361 tctctgaatctgt 373
           |||||||||||||
Sbjct: 561 tctctgaatctgt 573


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space:   278096
Effective search space used:   278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no433_i22.g1 MSMg01no433_i22.g1 CHROMAT_FILE:
MSMg01no433_i22.g1 PHD_FILE: MSMg01no433_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:41 2005
         (323 letters)



>mm_chr5_119874228_119874950
          Length = 723

 Score =  578 bits (299), Expect = e-169
 Identities = 317/323 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cactctctcttcttagaaggtgtgagacagggacctggcccccactgcatacctcatggt 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 523 cactctctcttcttagaaggtgtgagacagggacctgggccccactgcatacctcatggt 464

                                                                       
Query: 61  gactgggtggcagatctgggtcccagcactagttctgagatcgaccttcctcccttttgg 120
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 463 gactgggtggcagagctgggtcccagcactagttctgagatcgaccttcctcccctttgg 404

                                                                       
Query: 121 ggtcaggaactggaatggtgccaggtttctggacttggccaggaaggcagtataagttcg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggtcaggaactggaatggtgccaggtttctggacttggccaggaaggcagtataagttcg 344

                                                                       
Query: 181 gacccacagccaacaacctacggagaagaattgtggagttggggcatgacttcaggggtt 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gacccatagccaacaacctacggagaagaattgtggagttggggcatgacttcaggggtt 284

                                                                       
Query: 241 ttgctcattcttggatgggagagcatcacagagcaaagagtagcacccatcatggaagct 300
           |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgctccttcttgggtgggagagcatcacagagcaaagagtagcacccatcatggaagct 224

                                  
Query: 301 agggagcagagaggggctaggag 323
           |||||||||||||||||||||||
Sbjct: 223 agggagcagagaggggctaggag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)