XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACCA
GCAAATGACTTATATTTAACAAGGATATTAGGATTCTAGTTGTCACGCCC
AGCAATTGAGCTACCATTGTTTTTGAATTAAGTTTGTGTGTTATTTTCCT
TTACGTGGTGGCTCAACTAGGTTCCAGAGAGAAAGATACGGCGGCAAAGC
ATGGGTTTGCCTGATATTTACCCCACATAAAGTTTTGAAGTATGAGACTG
GCATGGTAGCGACCTGCCAGTGGGAACTTAGTGAGCTGGGTGGAGATGTT
TCAGGAGCTCCAGACCAGAGAGTCTGCCCAGAAGAGAACACCCTGTTGGT
ACCATGTGGCCTGCTGGTGCCTGGTGTAGCTCAGGAGATTGGTGATCTTT
TTAATATTTCCCGCAACACCACACACACAGACATAAAAATAGAAATCAAA
AAAGTACACAGGAGTCCCCTCTTTCTCAACAGGGCCTCATGTATTCCAGG
GTAGCCTCAAGCCTATTAGAAGCTAAGGGTGACCCTGAACTCCTGATCCT
CCTGCCTCCACCACTGGAGTTCTAGGATTACAGACGGGCATTGCCTTGTT
CGTTTCATGCAGTGCTTAGGGTTGGAGCCCGGGAATCCCTGTTATGTCCC
ATCAGAACGTCTATTGAATAATCCTTGTCCCTGTTCTCGAAGCTGGGTCT
TTTTTTGGCGGTTTTTTCTGCGGACTATTTGTCCTAATGCTTCCCTCC

TGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTGCAGTCCCTCCAGCGTCCCCTAGACAGGTC
CTACCAACTTCACGTGCTCCCTGCTTTGACCATTCTGGAACAAACTGCTT
TCCTGTGGGGTTCTCAGCTGGCAGCAGTGCGCCTCAGAATTAAACGACAC
AGCGGAGCTGAGAACAGCTGGTGAGAATAGAACACTCAATAGGCACCACC
GACTTCCTTCCAGATTCATTACTCTCCAGTCGTGAGGCCACCAACAAAAA
CTGAATATGTTCCACCAGAAGCCATGACTGGTGGTACAGCCTGCACGTGA
GGTGAACTGCTTGGGAAGAAGCTCAATCAGAAAGATCACAAGTTCAAGGC
CAATCCTATCTCAGAAAGTAAAAATGTAGCTCTGGTAGAATGCTTGCTAG
AGGACAGGGAGGGGCTGGGGGCGTGGCTCAGGGGTAGAGCCCCTGCCTAG
AATCCCCCAGTGAGGGGTTGTGGTCGTGGTTCTTTGGTTTAAGCCCTTGC
CAATATTCCCCAGTAGGTCCTCGTTCTCTTGTCTCATTTTCTATTCCCTT
CTAAAACTCTTATCATCTTTCTTTCTCTCTTCCTTTCCTTTCTCTACTCC
TCTTTTCATCTCCTTCTCATCATTTCCTTTCATTTTCCCACCCTTTTTTC
TATCCAACATCTCTTCTCCCCCTTTCACTTTTTTTCCCTTCG

Query= MSMg01no434_b09.g1 MSMg01no434_b09.g1 CHROMAT_FILE:
MSMg01no434_b09.g1 PHD_FILE: MSMg01no434_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:23 2005
         (444 letters)



>mm_chr5_140843622_140844465
          Length = 844

 Score =  816 bits (422), Expect = 0.0
 Identities = 437/442 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgcagtccctccagcgtcccctagacaggtcctaccaacttcacgtgctccctgctttg 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ttgcagtccctccagcgtcccctagacaggtcctatcaacttcacgtgctccctgctttg 260

                                                                       
Query: 61  accattctggaacaaactgctttcctgtggggttctcagctggcagcagtgcgcctcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accattctggaacaaactgctttcctgtggggttctcagctggcagcagtgcgcctcaga 320

                                                                       
Query: 121 attaaacgacacagcggagctgagaacagctggtgagaatagaacactcaataggcacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 attaaacgacacagcggagctgagaacagctggtgagaatagaacactcaataggcatca 380

                                                                       
Query: 181 ccgacttccttccagattcattactctccagtcgtgaggccaccaacaaaaactgaatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgacttccttccagattcattactctccagtcgtgaggccaccaacaaaaactgaatat 440

                                                                       
Query: 241 gttccaccagaagccatgactggtggtacagcctgcacgtgaggtgaactgcttgggaag 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 gttccaccagaagccatgactggtggtacagcctgcatgtgaggtgaactgcttgggaag 500

                                                                       
Query: 301 aagctcaatcagaaagatcacaagttcaaggccaatcctatctcagaaagtaaaaatgta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagctcaatcagaaagatcacaagttcaaggccaatcctatctcagaaagtaaaaatgta 560

                                                                       
Query: 361 gctctggtagaatgcttgctagaggacagggaggggctgggggcgtggctcaggggtaga 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 561 gctctggtagaatgcttgctagaggacagggaggggctgggggtgtggctcagtggtaga 620

                                 
Query: 421 gcccctgcctagaatcccccag 442
           ||||||||||||||||||||||
Sbjct: 621 gcccctgcctagaatcccccag 642


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space:   361956
Effective search space used:   361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)