AATTTTGCGGCGCTATACGACTCACTATTTCCAGAGGATCCGCGGAATTC
TAGTTCTGCCAAAAAATATAGCATCTGNATTATACTGATCATGAATAAAC
ACCAACAGTGAGACACTGGACACAGGAAATACACAGGACAAAGGGACACT
GCCTATTAAATCAGCGTTAGGCTCCTCTCATGCCACTTATTGAACCTGTG
TGGAATCCAGGCATGTTTGTTGTTAACCCATATTGGTTTGCAAATGACCT
CCGAGTCACTAATGAATAACTGATCTCTCTTCTTCAGTAAACATGAATGT
CTTCCCTCTGGACCTACTCAGTCTAGAAGAAAAACAAATCCTTGTCATGA
AAGCATCTGAGAAAGAGTGAAGGGTTTTCCTGACATCCTTCTCTGAACAG
AGTACACAAGACCATGTTGAACTCATTCTTTCCTGTTTCTGTGACTTCTT
GATGCTTTGGGGGGCATGTGAGAAAGAAGGTCAAGGAGATATAGCTGCAA
GGGGCTAGCTCTATAATGGCTTCAGAGACTTGTCAATCTACACTTCTTGT
GATGGGCTTGAACCACTATCTAGCTTCTGGCAATGATTTGTGTTGAAATG
GAGNGGGGGCGCCCCCAAGGATTAAAAAAACCGCTTGGGAATCCTGCGGT
CAATACCCTCCTGTTGGTGGCCCGAAGGAAAACCACTGTATTTAAAATAC
TTTTGCGGAAAACAGAGAACATTTTTTCCCCCAATCTTGTATGACCCTTT
ATCCTCATAACGTATTCCGC

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXACCAGGAGGAGGGAGGCAGGAGGCCTGGGA
TGGCCTCCAGGAGCAGCTTTATTATAGAAGCAGGTTTCTCTTGGCCTTTG
TTATAGTTATTTTCTCGTTGTTGTGTCAAAATACCCAATGGAAGTTCCCT
AGGGAAGGAGGATTGTTTAGGCTCACAGCTTGATAATGGAGTTAATCATG
ACAAGCAAGTATGGTGGCCAGAATTGGTCATTTCAACCAGTTCTCTCTTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTGTCTCTCTCCACACAGACATACAGACACA
TCTAAGTGGACATTCCTACATATAAATTAACAATAATACCTTACTATTTT
TATTTGTTCCACATTATAAAGATGCCTAAGTGTCCCCCAAGACACTAAGA
GTCATTCTTCCTCATTTTGGCACCTTGTATACTCTTCCCCACTTCCTTTT
ATTATAGACACTATTTGCCTATTGTTTTGCCTCTTTTTGTATAACTTTCG
CCCATTTTCTTTTTACCCCCCCCCCCACTCCCTTATTTTTTCCCTCCTTT
TTCCCCTTTCTATCTAACCGTTTTAAATTCTAACTGGCCCTTTCTATATG
TCCTTCTCTTTTACCTTCCTTTTTTTTCTTTTATTTCCCCACCCTGTTTT
ATATTTTTCTCTCCTTTCCCTTTTTACTTAGTCTTTN

Query= MSMg01no435_a19.b1 MSMg01no435_a19.b1 CHROMAT_FILE:
MSMg01no435_a19.b1 PHD_FILE: MSMg01no435_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:38 2005
         (457 letters)



>mm_chr5_27800096_27800952
          Length = 857

 Score =  878 bits (454), Expect = 0.0
 Identities = 456/457 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagcatctgnattatactgatcatgaataaacaccaacagtgagacactggacacaggaa 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tagcatctgtattatactgatcatgaataaacaccaacagtgagacactggacacaggaa 598

                                                                       
Query: 61  atacacaggacaaagggacactgcctattaaatcagcgttaggctcctctcatgccactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atacacaggacaaagggacactgcctattaaatcagcgttaggctcctctcatgccactt 538

                                                                       
Query: 121 attgaacctgtgtggaatccaggcatgtttgttgttaacccatattggtttgcaaatgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 attgaacctgtgtggaatccaggcatgtttgttgttaacccatattggtttgcaaatgac 478

                                                                       
Query: 181 ctccgagtcactaatgaataactgatctctcttcttcagtaaacatgaatgtcttccctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctccgagtcactaatgaataactgatctctcttcttcagtaaacatgaatgtcttccctc 418

                                                                       
Query: 241 tggacctactcagtctagaagaaaaacaaatccttgtcatgaaagcatctgagaaagagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tggacctactcagtctagaagaaaaacaaatccttgtcatgaaagcatctgagaaagagt 358

                                                                       
Query: 301 gaagggttttcctgacatccttctctgaacagagtacacaagaccatgttgaactcattc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gaagggttttcctgacatccttctctgaacagagtacacaagaccatgttgaactcattc 298

                                                                       
Query: 361 tttcctgtttctgtgacttcttgatgctttggggggcatgtgagaaagaaggtcaaggag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tttcctgtttctgtgacttcttgatgctttggggggcatgtgagaaagaaggtcaaggag 238

                                                
Query: 421 atatagctgcaaggggctagctctataatggcttcag 457
           |||||||||||||||||||||||||||||||||||||
Sbjct: 237 atatagctgcaaggggctagctctataatggcttcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space:   378609
Effective search space used:   378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)