Query= MSMg01no435_i14.b1 MSMg01no435_i14.b1 CHROMAT_FILE:
MSMg01no435_i14.b1 PHD_FILE: MSMg01no435_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:19 2005
(428 letters)
>mm_chr5_52405242_52406069
Length = 828
Score = 781 bits (404), Expect = 0.0
Identities = 419/424 (98%)
Strand = Plus / Plus
Query: 5 gaattcctcatttcccagtcccagcatcataaaaagctgtactcttgggtgttcttctca 64
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattcctcacagcccagtcccagcatcataaaaagctgcactcttgggtgttcttctca 264
Query: 65 gtacctgctctttctgaagtgcactgacctcagagatgggctgtaaccagctttagtctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtacctgctctttctgaagtgcactgacctcagagatgggctgtaaccagctttagtctt 324
Query: 125 aggaatggtgcatctcctccctctcattttgtcaccccctcccccaccccaaatcataag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggaatggtgcatctcctccctctcattttgtcaccccctcccccaccccaaatcataag 384
Query: 185 tttcaggctccagcatcaccttcatcacccagccctacgcccaaggcccagaaaatgacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttcaggctccagcatcaccttcatcacccagccctacgcccaaggcccagaaaatgacc 444
Query: 245 aaacgaataatgaattcattaggagatcatagttctgtccttggggtcagagaaaaaagt 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 aaacgaataatgaattcattaggagatcagagttctgtccttggggtcagagaaaaaagt 504
Query: 305 aaagacactttacattcgttttgtttaaaataagatgcagggagagatgaaatgagtaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagacactttacattcgttttgtttaaaataagatgcagggagagatgaaatgagtaat 564
Query: 365 gctctttgttgctgactaaagtccacagccaagaagtagccaaggataagcctcattgcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctctttgttgctgactaaagtccacagccaagaagtagccaaggataagcctcattgcc 624
Query: 425 ttaa 428
||||
Sbjct: 625 ttaa 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_i14.g1 MSMg01no435_i14.g1 CHROMAT_FILE:
MSMg01no435_i14.g1 PHD_FILE: MSMg01no435_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:19 2005
(239 letters)
>mm_chr5_52568825_52569460
Length = 636
Score = 437 bits (226), Expect = e-127
Identities = 235/240 (97%), Gaps = 5/240 (2%)
Strand = Plus / Minus
Query: 1 caggcttatgggataatgtgtgcgcccccccccccc-gtaggtttgagcatggcccgttg 59
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 436 caggcttatgggataatgt----gccccccccccccagtaggtttgagcatggcccgttg 381
Query: 60 cacatgtgtgagtatgtatcagaacaacttatggttctctctattgtgtgtgtgcatgct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacatgtgtgagtatgtatcagaacaacttatggttctctctattgtgtgtgtgcatgct 321
Query: 120 gttttgagatagggtctctatcgtccttcctgtcctggtttttgctttagaaattaggat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gttttgagatagggtctctatcgtccttcctgtcctggtttttgctttagaaattaggat 261
Query: 180 tgtctagaactgagttctacctgagcttcctgaccatgtggaacagttaagttttttgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtctagaactgagttctacctgagcttcctgaccatgtggaacagttaagttttttgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 636
Length adjustment: 9
Effective length of query: 230
Effective length of database: 627
Effective search space: 144210
Effective search space used: 144210
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
