Query= MSMg01no435_n15.b1 MSMg01no435_n15.b1 CHROMAT_FILE:
MSMg01no435_n15.b1 PHD_FILE: MSMg01no435_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:45 2005
(366 letters)
>mm_chr5_53198015_53198780
Length = 766
Score = 663 bits (343), Expect = 0.0
Identities = 359/365 (98%), Gaps = 2/365 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttacagtaccaggaaggcaagggggtgattatggtgacagaccctccctttgg 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattcttacaggaagaggaaggcaagggggtgattatggtgacagaccctccctttgg 261
Query: 64 cggcttggtggaacctctggctattacattcaagaagttaattgctatgtggaaagaagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cggcttggtggaacctctggctattacattcaagaagttaattgctatgtggaaagaagg 321
Query: 124 tcaaagccaaggtgcc--ttttttttttaaattttttttgttaattactgcaaaatgagc 181
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 322 tcaaagccaaggtgcctttttttttttttaattttttttgttaattactgcaaaatgagc 381
Query: 182 tcgtgtttatgtgtctgcttctgcttcctgtcaacacgagccaagcctagcagttacgga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcgtgtttatgtgtctgcttctgcttcctgtcaacacgagccaagcctagcagttacgga 441
Query: 242 gtgtgcagctctgggctctctgtaaaagcacatttgattggatgatggcaaacttcatga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtgtgcagctctgggctctctgtaaaagcacatttgattggatgatggcaaacttcatga 501
Query: 302 ccatgggacacttcctcttaccctagtcatgttttttaaatggcttctcaggaccatggt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccatgggacacttcctcttaccctagtcatgttttttaaatggcttctcaggaccatggt 561
Query: 362 tgtaa 366
|||||
Sbjct: 562 tgtaa 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_n15.g1 MSMg01no435_n15.g1 CHROMAT_FILE:
MSMg01no435_n15.g1 PHD_FILE: MSMg01no435_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:45 2005
(385 letters)
>mm_chr5_53376752_53377536
Length = 785
Score = 683 bits (353), Expect = 0.0
Identities = 377/385 (97%)
Strand = Plus / Minus
Query: 1 tgttgtcccattgttatttatttattcatttattttaagacaggatactcctgtgcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgttgtcccattgttatttatttattcatttattttaagacaggatactcctgtgcaaat 451
Query: 61 caagttggcatcaagttctcaaggctcctgccacagccctaggtacactaagtttttaca 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 450 caagttggcatcaagttctcaaggctcctgccacagccctaggtacattaagtttttaca 391
Query: 121 gttgagagatggaattgatgaacaatgactaaccttcccactgcctgtaattcctagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gttgagagatggaattgatgaacaatgactaaccttcccactgcctgtaattcctagcag 331
Query: 181 tgactagcagagtcactttgtgactctctatctcagcctgagaccctttctggaacaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgactagcagagtcactttgtgactctctatctcagcctgagaccctttctggaacaagg 271
Query: 241 tgattattatgtaaatggctttacactccagcccctctcaggtgtttttagtagagcaga 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgagcagcatgtaaatggctttacactccagcccctctcaggtgtttttagtagagcaga 211
Query: 301 aatgtgattaagccgggcgtggtgacacacacctttaatcccagcactcgggaggcagag 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aatgtgattaagcggggcgtggtgacacacacctttaatcccagcactcgggaggcagag 151
Query: 361 gcaggcggatttctgatttcgaggc 385
|||||| ||||| ||||||||||||
Sbjct: 150 gcaggcagatttttgatttcgaggc 126
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|