CCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGACCGCGG
AATTCCTGATCTTTCCCAGACTTTTATCATGAATGGGCGTTGGATTTTGT
CAAATGCTTTCTCAGCATCTAATGAGATAATCATGTGGTTTTTGTCTTGG
AGTTTGTTTATATACTGGATTACGTTGATGGATTTCCATATATTGAACCA
TCCCTGTATCCCTGTGATGAAACCTACTTGGTCATGATGGATGATTGCTT
TGACGTGTTCTTGGATTCTTTCAGCACGATCTTTATTGAGTATCTCTGCA
TCAATATTCATATGGTATTTTGTTATTAAGCTCTCTATTATTGAGCTGCG
TCTTTGCTTTTCACTTCTTCACATTTCTTTGTTCCTTTTTATCATTACTT
CCTCTCTTCCTCTTCTCCCTTATCCTTTTCCTTTTTTCTATCCTTTTCTT
CCTTCCTTTTTCTTCCATCTTCTCTTTTAATCTTTTTTTTTATATTCTTT
TCACTTTCTCCTTCCCTCCTCTTTATTCCCCTTTTCTTTTTTTTCTCCCT
ATTTCTCTTCTTATTCTCTTTTTTTCCCCCTCTCTTTTCCCACCTTTCAC
CTTTTTTCTTTACTTTTTCCACTCCTTCTTTGCTCTTCTTTCCCATCTTA
TACTCTCCTTTTCCTCCTTTCTCCTCCACACTTTTTACTTCCCCTTTTTC
TACCCCCCATTTCTCCTCTTTTTCTTCTTCTCTTTTTCCCATCTTTCTCC
TTACTCTATCTCTATTTTTTCTCCTTCCTTTCTTATTTCCCTTTCACCCC
CCTATCTTTTCTCCCTTTCTTTTTTTTTTT

CCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTCAATTTTATTGAAAATGAGAAAAC
GTAGAAAGACTTCTGGTCCCTTCTCCAGGAAAAATGACGTGGCTTAGAGG
TCTTTCGTATACTAATGAGAATGTTCTAGAGAATATTGGAACGAGGTTTG
GTGCTAATGGGATGTGTAACACACACTTCACAAGTCAGTAGGAAGTGTGG
AAAACACTTGTCAGATTTATTTTATGTGAATATGCCACCTGCATGTGCTA
AGTACCCACGCCCCCACCATAGTAAGATTCCTGCTGTGGGTTTACTATGG
ATTGCCAACCCTACCTTCAAGACCATTTACTAATTAAAACTACACACATG
TTCACATCTTAAAGAGTTAAACTCATGGTATAAAAGTGCTAAAATTTAAT
ATGACTTCGGGGTTGCAAGTCCAATTATTTGTGACCGATTATGTAACATC
AGAGCATCAGAGTGTGGGGCTTAATTAAACTCCTGATGGCCTTTTGAGGA
GCAAAAATGAGATCACAGAGGTACACAGGTCACTACCATGATATGATGCA
GGTTGGACTATTTTAAAGCCTGCTCCATGATGAGACCATCTCTATCCATG
ATCCAGAAAGAAATATTTTATTATTTTTCTCTACCATGTTGACTTGCTTT
GCCCATTTTCCTATAATAATAAATTAACCAGATGACTTATAAAAGCGGGT

Query= MSMg01no436_k16.g1 MSMg01no436_k16.g1 CHROMAT_FILE:
MSMg01no436_k16.g1 PHD_FILE: MSMg01no436_k16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:48 2005
         (531 letters)



>mm_chr5_83253983_83254914
          Length = 932

 Score =  975 bits (504), Expect = 0.0
 Identities = 525/532 (98%), Gaps = 1/532 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcaattttattgaaaatgagaaaacgtagaaagacttctggtcccttctccaggaaaa 60
           ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 732 cttcaatgttattgaaaatgagaaaacgtagaaagacttcttgtcccttctccaggaaaa 673

                                                                       
Query: 61  -atgacgtggcttagaggtctttcgtatactaatgagaatgttctagagaatattggaac 119
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 catgacttggcttagaggtctttcgtatactaatgagaatgttctagagaatattggaac 613

                                                                       
Query: 120 gaggtttggtgctaatgggatgtgtaacacacacttcacaagtcagtaggaagtgtggaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gaggtttggtgctaatgggatgtgtaacacacacttcacaagtcagtaggaagtgtggaa 553

                                                                       
Query: 180 aacacttgtcagatttattttatgtgaatatgccacctgcatgtgctaagtacccacgcc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aacacttgtcagatttattttatgtgaatatgccacctgcatgtgctaagtacccacgcc 493

                                                                       
Query: 240 cccaccatagtaagattcctgctgtgggtttactatggattgccaaccctaccttcaaga 299
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cccaccaaagtaagattcctgctgtgggtttactatggattgccaaccctaccttcaaga 433

                                                                       
Query: 300 ccatttactaattaaaactacacacatgttcacatcttaaagagttaaactcatggtata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccatttactaattaaaactacacacatgttcacatcttaaagagttaaactcatggtata 373

                                                                       
Query: 360 aaagtgctaaaatttaatatgacttcggggttgcaagtccaattatttgtgaccgattat 419
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 372 aaagtgctaaaatttaatatgacttgggggttgcaagtccaattatttgtgactgattat 313

                                                                       
Query: 420 gtaacatcagagcatcagagtgtggggcttaattaaactcctgatggccttttgaggagc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtaacatcagagcatcagagtgtggggcttaattaaactcctgatggccttttgaggagc 253

                                                               
Query: 480 aaaaatgagatcacagaggtacacaggtcactaccatgatatgatgcaggtt 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaaaatgagatcacagaggtacacaggtcactaccatgatatgatgcaggtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 932
Length adjustment: 10
Effective length of query: 521
Effective length of database: 922
Effective search space:   480362
Effective search space used:   480362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)