Query= MSMg01no437_e22.b1 MSMg01no437_e22.b1 CHROMAT_FILE:
MSMg01no437_e22.b1 PHD_FILE: MSMg01no437_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:39 2005
(433 letters)
>mm_chr5_26970603_26971436
Length = 834
Score = 770 bits (398), Expect = 0.0
Identities = 422/430 (98%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 5 gaattccccataaaatcc-acattctaaatgaggtgaattttatctgctcaaagtaggca 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaattccccataaaaaccaacattctaaatgaggtgaattttatctgctcaaagtaggca 575
Query: 64 aactgttttcaatcaccatggcaaatctagccacattaacattaattaatatactaatta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aactgttttcaatcaccatggcaaatctagccacattaacattaattaatatactaatta 515
Query: 124 aaagtcattctcattaagcttattaagtttttctcattggtaaaatttttctggagtttc 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aaagtcattctcattaagcatattaagtttttctcattggtaaaatttttctggagtttc 455
Query: 184 ctgtgtaacttggactagagccagaggcatttgcatcatgtgactctggagtgttgcaga 243
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 454 ctgtgtaacttggactagagccagaggcatttgcatcacatgactctggagtgttacaga 395
Query: 244 attcaaaccctgttacccagtttatctaaacccctgtggtttgcaatgaatttatacttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 attcaaaccctgttacccagtttatctaaacccctgtggtttgcaatgaatttatacttc 335
Query: 304 tctcctagacatagaaatagaaagattaagtataattactgttcttaaatcattaatatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tctcctagacatagaaatagaaagattaagtataattactgttcttaaatcattaatatt 275
Query: 364 tcaaaaattcttttggttatgactatccaggtcatttggaaaacacaaaattcaaaaaat 423
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 274 ttaaaaattcttttggttatgactatccaggtcatttgaaaaacacaaaattcaaaaaat 215
Query: 424 gggagaaaac 433
||||||||||
Sbjct: 214 gggagaaaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_e22.g1 MSMg01no437_e22.g1 CHROMAT_FILE:
MSMg01no437_e22.g1 PHD_FILE: MSMg01no437_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:39 2005
(384 letters)
>mm_chr5_26804193_26804976
Length = 784
Score = 644 bits (333), Expect = 0.0
Identities = 373/395 (94%), Gaps = 15/395 (3%)
Strand = Plus / Plus
Query: 1 catacatatcaagagttttactcctgacatggaccatctaaccacatgatttgcctagaa 60
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 194 catacatattaagagttttattcctgacatggaccatctaaccacatgatttgcctagaa 253
Query: 61 aatgaaaaactatttaatatgcaaaaagcattgttaagtgcattagaagcgtgggaaaat 120
|||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 254 aatgaaaaac----taatatgcaaaaagcattgttcagtgcattagaagcatgggaaaat 309
Query: 121 agttgaatgtcatatctaaatctactttccttcagtcattgaataagaaatttaaaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agttgaatgtcatatctaaatctactttccttcagtcattgaataagaaatttaaaaaca 369
Query: 181 tacctacaggaataattcctagccttctggagtctggaagtctcatgtacctgtacaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tacctacaggaataattcctagccttctggagtctggaagtctcatgtacctgtacaaat 429
Query: 241 ctgaaacgaa-----------agacaaggattctgctgatccagtaagaagctaggtgta 289
||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctgaaacaaacaaacaaaaaaagacaaggattctgctgatccagtaagaagctaggtgta 489
Query: 290 cttgtagtcttttctcctgtgttgcctttcttccagatgaaggcatcatagtagagatgg 349
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 490 cttgtagtcttttctcctgtgttgccttccttccagatgaaggcatcatagtagagatgg 549
Query: 350 atattaatatgagagatgggactttggaaaatatg 384
||||||||||||||||||||||||||||||||||
Sbjct: 550 ctattaatatgagagatgggactttggaaaatatg 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
