Query= MSMg01no437_i11.b1 MSMg01no437_i11.b1 CHROMAT_FILE:
MSMg01no437_i11.b1 PHD_FILE: MSMg01no437_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:57 2005
(125 letters)
>mm_chr5_40028125_40028650
Length = 526
Score = 226 bits (117), Expect = 3e-64
Identities = 123/125 (98%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 1 agtcaatcaaagtcctatatcagcacttagaatacagtgagagaaaggtgattgcagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtcaatcaaagtcctatatcagcacttagaatacagtgagagaaaggtgattgcagatg 266
Query: 61 aagctggaatgaaaaggcatgcttgccttgctgtgctcag-aacaataactgcaccagaa 119
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 265 aagctggaatgaaaaggcatgcttgccttgctgtgctcagaaaaaataactgcaccagaa 206
Query: 120 acagg 124
|||||
Sbjct: 205 acagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 526
Length adjustment: 8
Effective length of query: 117
Effective length of database: 518
Effective search space: 60606
Effective search space used: 60606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no437_i11.g1 MSMg01no437_i11.g1 CHROMAT_FILE:
MSMg01no437_i11.g1 PHD_FILE: MSMg01no437_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:57 2005
(249 letters)
>mm_chr5_39908681_39909329
Length = 649
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%)
Strand = Plus / Plus
Query: 1 ctgcagggtaacggttgaggatgattggttgaagattctgcaatcaaagtagtgaagatc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcagggtaatggttgaggatgattggttgaagattctgcaatcaaagtagtgaagatc 260
Query: 61 agggataagaagccaagtctgtgtatacccagagctgttgacttccatagagaagacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggataagaagccaagtctgtgtatacccagagctgttgacttccatagagaagacaca 320
Query: 121 gtgaagataactcacctgtagtccagagttatagttttaggagatatatttccataagtg 180
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgaagataattcaactgtagtccagagttatagttttaggagatatatttccataagtg 380
Query: 181 caatgctttatttattttagtgtactgtaaatttgtgattgacatacctagcagttttac 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 caatgctttatttattttagtgtactgtaaatttgtgattgacatacctatcagttttac 440
Query: 241 atatttatg 249
|||||||||
Sbjct: 441 atatttatg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
