MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-440E05
Chromosome	5 (Build37)
Map Location	8,017,399 - 8,017,769
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042651, 4921511H03Rik, LOC242823, LOC667767, EG546855, Steap4
Downstream gene	Sri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042651 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 922 ESTs, 75 Proteins

name	4921511H03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70920 MGI:1918170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC242823 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins pseudo : _no_value

name	LOC667767 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins pseudo : _no_value

name	EG546855 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546855 MGI:3646338
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Steap4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117167 MGI:1923560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sri (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109552 MGI:98419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC433840 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 235 ESTs, 2 Proteins pseudo : _no_value

name	Adam22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11496 MGI:1340046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Dbf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27214 MGI:1351328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319653 MGI:2442486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm440 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242819 MGI:2685286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18671 MGI:97570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG330031 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330031 MGI:3643983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Abcb1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18669 MGI:97568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18670 MGI:97569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crot (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74114 MGI:1921364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042651 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253526 GeneID:100042651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 922 ESTs, 75 Proteins product : similar to Tubulin, beta 4 transcript_id : XM_001479032.1

name	4921511H03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363628 GeneID:70920 MGI:1918170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921511H03 gene transcript_id : NM_027603.2

name	EG546855 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82801701 GeneID:546855 MGI:3646338
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG546855 transcript_id : XM_889752.1

name	Steap4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131114 GeneID:117167 MGI:1923560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : STEAP family member 4 transcript_id : NM_054098.3

name	Sri (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430542 GeneID:109552 MGI:98419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorcin transcript_id : NM_025618.2

name	Sri (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430536 GeneID:109552 MGI:98419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorcin transcript_id : NM_001080974.1

name	Adam22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56790898 GeneID:11496 MGI:1340046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 22 transcript_id : NM_001007220.2

name	Adam22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56790899 GeneID:11496 MGI:1340046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 22 transcript_id : NM_001007221.1

name	Dbf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130853 GeneID:27214 MGI:1351328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DBF4 homolog (S. cerevisiae) transcript_id : NM_013726.2

name	Slc25a40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801661 GeneID:319653 MGI:2442486
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 40 transcript_id : NM_178766.3

name	Gm440 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930588 GeneID:242819 MGI:2685286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 440, (NCBI) transcript_id : NM_198620.1

name	Abcb1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755047 GeneID:18671 MGI:97570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 1A transcript_id : NM_011076.1

name	EG330031 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374177 GeneID:330031 MGI:3643983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG330031, transcript variant 1 transcript_id : XM_900508.2

name	Abcb1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755045 GeneID:18669 MGI:97568
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 1B transcript_id : NM_011075.1

name	Abcb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679296 GeneID:18670 MGI:97569
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 4 transcript_id : NM_008830.1

name	Crot (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387204 GeneID:74114 MGI:1921364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carnitine O-octanoyltransferase transcript_id : NM_023733.3

name	LOC100042651 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253527 GeneID:100042651
definition	codon_start : 1 product : similar to Tubulin, beta 4 protein_id : XP_001479082.1

name	4921511H03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559372 CCDS:CCDS19078.1 GeneID:70920 MGI:1918170
definition	codon_start : 1 product : hypothetical protein LOC70920 protein_id : NP_081879.1

name	EG546855 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82801702 GeneID:546855 MGI:3646338
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894845.1

name	Steap4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981509 GeneID:117167 MGI:1923560
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0045444 - fat cell differentiation [Evidence ISS] codon_start : 1 note : tumor necrosis factor, alpha-induced protein 9 product : Tnfa-induced adipose-related protein protein_id : NP_473439.2

name	Sri (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430543 CCDS:CCDS19079.1 GeneID:109552 MGI:98419
definition	GO_component : GO:0005622 - intracellular [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : sorcin isoform 2 protein_id : NP_079894.2

name	Sri (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430537 GeneID:109552 MGI:98419
definition	GO_component : GO:0005622 - intracellular [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : sorcin isoform 1 protein_id : NP_001074443.1

name	Adam22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56790900 GeneID:11496 MGI:1340046
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; a disintegrin and metalloprotease domain (ADAM) 22; a disintegrin and metalloprotease domain 22 product : a disintegrin and metalloprotease domain 22 isoform b protein_id : NP_001007222.1

name	Adam22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55742840 CCDS:CCDS19080.1 GeneID:11496 MGI:1340046
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; a disintegrin and metalloprotease domain (ADAM) 22; a disintegrin and metalloprotease domain 22 product : a disintegrin and metalloprotease domain 22 isoform a protein_id : NP_001007221.1

name	Dbf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304903 CCDS:CCDS19081.1 GeneID:27214 MGI:1351328
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0007090 - regulation of S phase of mitotic cell cycle [Evidence ISS]; GO:0007089 - traversing start control point of mitotic cell cycle [Evidence ISS] codon_start : 1 product : activator of S phase kinase protein_id : NP_038754.1

name	Slc25a40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520231 GeneID:319653 MGI:2442486
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial carrier family protein protein_id : NP_848881.1

name	Gm440 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930589 CCDS:CCDS19083.1 GeneID:242819 MGI:2685286
definition	codon_start : 1 product : hypothetical protein LOC242819 protein_id : NP_941022.1

name	Abcb1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755048 CCDS:CCDS19084.1 GeneID:18671 MGI:97570
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042623 - ATPase activity, coupled [Evidence IDA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0015893 - drug transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : multi-drug resistance 3; P glycoprotein 3; multiple drug resistant 1a; ATP-binding cassette, sub-family B (MDR/TAP), member 4; ecotropic viral integration site 32 product : ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein_id : NP_035206.1

name	EG330031 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82801587 GeneID:330031 MGI:3643983
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_905601.1

name	Abcb1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755046 CCDS:CCDS19085.1 GeneID:18669 MGI:97568
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : P glycoprotein 1 product : ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein_id : NP_035205.1

name	Abcb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679297 CCDS:CCDS19086.1 GeneID:18670 MGI:97569
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : P glycoprotein 2 product : ATP-binding cassette, sub-family B (MDR/TAP), member 4 protein_id : NP_032856.1

name	Crot (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17157983 CCDS:CCDS19087.1 GeneID:74114 MGI:1921364
definition	GO_component : GO:0005777 - peroxisome [Evidence IDA] GO_function : GO:0008458 - carnitine O-octanoyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0015908 - fatty acid transport [Evidence IDA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : carnitine O-octanoyltransferase protein_id : NP_076222.1

name	LOC242823 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:242823
definition	number : 1 pseudo : _no_value

name	LOC667767 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253528 GeneID:667767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins product : hypothetical LOC667767 pseudo : _no_value transcript_id : XR_034035.1

name	LOC433840 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253529 GeneID:433840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 235 ESTs, 2 Proteins product : similar to ribosomal protein L27 pseudo : _no_value transcript_id : XR_034051.1

clone name	MSMg01-321L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-233D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-440E05.T7 (MSMg01no440_e05.b1)	MSMg01-440E05.TJ (MSMg01no440_e05.g1)
ACC	AG530421	AG530422
length	752	753
length of high quality (start - end)	569 (58 - 626)	468 (81 - 548)
definition	CHROMAT_FILE: MSMg01no440_e05.b1 PHD_FILE: MSMg01no440_e05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:06:39 2005	CHROMAT_FILE: MSMg01no440_e05.g1 PHD_FILE: MSMg01no440_e05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:06:39 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXCGCGGAATTCAATGCAATTACCCTCAATAAAATTCTTAATAACCAAAT CCAAGAACACATCAAAACAATCATCCATCCTGACCAAGTAGGTTTCATCC CAGGGATAAAAGGATGGTTCAATATACGGAAATCCATCAACATAATCCAG TATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGC AGAAAAAGCATTTGACAAAATACAACACCCATTCATGATAAAATTCTTGG AAAGTCAGGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACA GCAAACCAGTAGCCAACATCAAAGTAAATGGTGAGAAGCTGGAAGCAATC CCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTCTT CAACACAGTACTTGAAGTCCTAGCCAGAGCAATTTGACCACAAAAAAAGA TCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTATTTGCA GATGATATGATAGTATATTTATGTGAACCTAAAAATTCCACTAGAGAACT CCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACT CAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAA GAATTAGGGAAACACACCCTTTTCAAAAGTCACAAATAATATAAAAATCT CG	NNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTGGACAACCGGATCCTT CTACGGCAAAGCTTTTATTGCTTCAACATAAGGAAGACCCCGAACCCGGA AAATGGTGCTGCTTATATAGCCCGCAATGTGATGTTTCAGCACCTGATGT GGCGTGACAGCACCTGATTAGTTGCTCGCCCATCACCCCATTACTACGCC CCGAGATGGGCAGTGACTGGGCGTGAATTTACTCTTGCACTTGCACATAA GGCTTGTTTACTAGTTAGGTGCAGTGTTTTTTAGCACCATCTTATAATGG CAATTGCTCACAGCACGGCTCTCCACACTGAACCAGTTGAGGGAGTGGCA GGAGCCCATTTTGTCCTTGGCTGGGAAAAGGGTTCCAAGGAGTAGTGTGG CTTAGGGAGCTTTCTCTTTGCTTTGGCTGTGCAGATCCCTCTTCCCCACA TGTGCTCCAGTTGTTGGGTTTCAGAGAGAGGTTTAGGGACCTTATGCCTA CACCAGAGAGTACTCTGGCCAGAAGGCATCAGATGTCCTTCCCATTTTTC TAAATCCAGGTGAAGGCTCCCACCTAAAACTTTTTACAACAGAGCTAATT TGTTTGCCTTCCCGCTGTGTTATTCTTGTTTTTTTGCTTTGATGGCTCCT TGCCCGGTTTTTATCTTGCTCTGTTTCCTTAAATCCTTCCTTTTCTTGTT TCN
quality values	Open. Hide. 0 0 0 0 0 3 7 6 8 8 10 10 12 12 23 28 31 30 39 37 31 31 27 30 37 37 37 37 39 44 44 59 30 30 31 30 27 17 23 13 14 14 9 11 12 19 19 15 15 15 15 9 9 11 25 25 22 20 20 24 30 33 33 33 30 23 18 11 11 9 11 11 11 10 13 21 25 33 33 37 39 37 37 47 47 50 50 59 53 53 53 53 53 50 47 40 37 42 34 34 42 34 34 42 42 51 51 50 50 47 47 68 68 68 68 50 51 50 50 50 50 68 50 50 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 46 46 46 46 46 48 57 68 48 48 46 46 46 48 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 44 39 27 17 17 23 27 43 43 43 44 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 57 57 57 57 54 57 57 59 57 68 59 57 57 57 59 68 68 68 68 59 59 52 52 52 59 59 57 57 57 59 59 57 57 54 54 50 57 57 57 48 50 50 59 59 57 57 57 57 48 48 48 57 57 57 54 54 47 57 47 54 54 59 59 57 48 48 48 48 59 59 48 54 57 59 59 59 59 59 48 59 57 59 59 59 59 68 57 54 54 54 54 54 54 59 54 48 48 48 48 48 59 48 48 48 57 57 48 48 48 48 57 57 59 48 50 50 50 46 46 47 47 41 41 39 31 31 37 37 30 30 30 25 22 22 25 37 39 37 37 37 46 59 39 37 41 41 41 39 47 37 36 25 32 43 41 23 23 11 10 10 21 25 37 37 40 34 36 33 19 12 9 9 9 11 9 9 9 9 14 22 28 20 20 25 22 22 22 22 24 39 35 31 25 25 24 22 22 13 13 13 19 19 24 29 34 25 21 10 10 10 10 10 10 12 19 19 23 23 16 18 10 9 9 9 9 9 13 20 16 21 16 15 13 14 10 12 12 12 12 21 15 21 13 10 10 16 13 19 14 25 22 22 12 9 9 9 8 9 10 13 13 13 13 15 17 16 24 17 17 15 19 17 10 8 8 8 8 8 8 11 18 21 20 14 12 8 8 8 8 8 10 9 9 11 11 13 15 15 15	Open. Hide. 0 0 0 3 6 6 7 10 11 8 9 9 9 8 15 19 19 9 9 10 15 23 29 37 37 37 37 37 37 32 32 37 37 23 25 9 9 9 9 9 7 7 7 10 10 10 26 22 28 19 28 37 37 47 47 47 47 44 44 59 50 47 36 27 22 9 9 11 10 10 10 9 9 11 9 11 22 22 31 31 33 33 36 48 47 38 42 42 42 57 43 57 47 50 53 53 53 53 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 48 42 36 36 39 44 57 57 57 59 59 59 59 57 57 57 57 57 51 68 68 68 68 68 68 68 68 68 68 48 48 46 42 42 48 57 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 50 50 50 50 50 50 68 68 68 68 68 57 59 59 68 68 68 68 68 68 68 68 68 59 59 57 57 68 68 68 68 68 68 68 68 50 51 51 51 51 68 68 68 68 68 68 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 57 43 32 21 14 14 14 18 21 32 44 48 68 57 57 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 57 68 68 68 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 23 23 9 12 12 13 17 11 9 9 9 9 15 25 36 41 50 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 47 34 32 20 23 20 20 20 20 34 44 59 39 59 59 59 57 57 57 68 57 57 59 57 57 59 54 59 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 68 59 59 57 57 57 57 57 68 68 57 57 57 57 41 38 38 50 50 43 50 50 50 50 52 52 52 52 57 57 57 57 57 57 43 52 52 52 52 52 44 44 35 35 59 59 59 59 57 57 59 59 68 68 68 68 57 57 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 68 59 59 57 57 48 57 57 57 43 43 43 59 59 59 44 43 43 43 44 47 47 41 28 28 16 20 20 32 32 48 34 24 12 12 12 15 24 19 29 29 42 42 42 34 24 15 15 16 16 28 32 34 25 19 19 15 15 13 10 10 10 13 11 11 13 15 21 29 34 28 34 30 34 23 11 9 10 9 9 10 12 10 10 10 23 11 15 15 10 10 12 19 10 9 9 15 19 19 19 10 14 14 14 15 25 29 37 37 37 28 28 27 28 19 13 12 18 18 10 10 9 9 9 10 10 10 16 12 16 24 12 10 9 10 10 12 12 10 14 10 10 9 9 9 13 19 15 16 11 11 11 11 11 10 13 13 11 13 17 12 10 10 16 11 10 10 9 9 9 9 9 9 18 9 9 9 10 11 9 9 9 9 10 10 10 9 9 11 11 12 9 9 9 13 11 10 12 11 11 10 13 11 11 10 11 11 10 8 8 6 6 8 12 20 21 12 12 9 9 12 12 15 15 14 12 12 9 8 8 8 8 8 8 8 10 9 9 10 9 8 8 8 8 7 7 10 8 8 8 10 9 10 9 9 9 11 10 10 12 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no440_e05.g1 MSMg01no440_e05.g1 CHROMAT_FILE:
MSMg01no440_e05.g1 PHD_FILE: MSMg01no440_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:39 2005
         (468 letters)



>mm_chr5_8016902_8017769
          Length = 868

 Score =  621 bits (321), Expect = 0.0
 Identities = 358/377 (94%), Gaps = 12/377 (3%)
 Strand = Plus / Minus

                                                                       
Query: 98  tgtgatgtttcagcacctgatgtggcgtgacagcacctgattagttgctcgcccatcacc 157
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 868 tgtgatgtttcagcacctgatgtggcatgacagcacctgattagttgctcgcccatcacc 809

                                                                       
Query: 158 ccattactacgccccgagatgggcagtgactgggcgtgaatttactcttgcacttgcaca 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 808 ccattactacgccccgagatgggcagtgactgggcgtgaatttactcttgcacttgcgca 749

                                                                       
Query: 218 taaggcttgtttactagttaggtgcagtg------ttttttagcaccatcttataatggc 271
           |||||||||||||||||||||||| ||||            |||||||||||||||||||
Sbjct: 748 taaggcttgtttactagttaggtgtagtggaagcc------agcaccatcttataatggc 695

                                                                       
Query: 272 aattgctcacagcacggctctccacactgaaccagttgagggagtggcaggagcccattt 331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 694 gattgctcacagcacggctctccacactgaaccagttgagggagtggcaggagccctttt 635

                                                                       
Query: 332 tgtccttggctgggaaaagggttccaaggagtagtgtggcttagggagctttctctttgc 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgtccttggctgggaaaagggttccaaggagtagtgtggcttagggagctttctctttgc 575

                                                                       
Query: 392 tttggctgtgcagatccctcttccccacatgtgctccagttgttgggtttcagagagagg 451
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 574 tttggctgtgcagatccctcttccccacatgtgctccagttgttgggtttcagaaagaga 515

                            
Query: 452 tttagggaccttatgcc 468
           |||||||||||||||||
Sbjct: 514 tttagggaccttatgcc 498


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space:   392964
Effective search space used:   392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information