NNTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACTTTGTGTAACTAGGTGATAGGTGATTACCACCCAAATGG
AAACTCTAAGCTGTCAACTCAGAGTTTGCTGGAAGGCTCCATAATTTGCC
TTCTGTAGACTCAAAGAATGACAAGGGAGAGTTTAGTGGGAAAGTTTAGT
GGTGGAGAAACAGAGGCTTCAGGTCTGCCACGACTGTGGGATGTTGGCGG
GAGGAGGCTAGAGGCACGCTAAGAAATAGGGCATCTTCCGCAATTTACTT
GAGCCTGTTTGGTTTTCAACCTGTGTGTTATGATCCTTTGGCAAACCTCT
ATCTCCAAAAATATTTACATTACGATTCATCACAGTAGCAAACTGCAGTT
ATGAAGTAGCAATGAAAGCAATGTTATGGTTGGGGGCACCATAACATGAG
GAACTGTAACGTACTAAAGGATCACGGCATCGGGAAGGTTGAGAACCACT
GCTCTAGCTGATCCTGAGCTGGAAGCACTAACAGAGCAATANGGACCGAG
GATGCCGGTTGGTGGCTGTGGAAGTTGGCCACACTCCCAGCGGCTTTGTT
TATTCTGTCGCGATGCCCAAGGTCTTTTCTAAAAAAAACCTTTTCTATAA
GGTGGTACTCCCGGGGCCTTGTTTGGAAAAGCCCCCCCTGAGGCCCCAAA
AAATTTTTCCATTTTTTTCCTCATTTGGTCTCCCCCAAGGGCCCCTGTGT
CACCCTGGGGTAAATTGTTTTT

TTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGTTTGGGGTTGGCCA
GAGGGAAGAAAACCCCAGGGCTTTGGGTCCAGAGCGGGAAGGCCACCACA
GTTTGCTTGGGGCACAAAAATAGAGATGTTGGAGTCAGGCTTTGCCCAAA
GCCACTATTTTGCTTGTGAGTGGACCTTACAATGAAATAGTATTAGTTCC
CCAGGAGACATAGATGCAGCCTCAATTACAGAGGGACAGAAACTTCCGGG
GCTGAAAGTAGAAACACAAGGGATGAGCAAAGGACAGAGAAGTGTTTTAC
AAACAGATGGAGCAGGTGAGTCCCCAGGCCAGTGGATGGAGCCAGGAGAA
AGCAGCCAGCAGGGCACAGCTGTTGGGAAGGAGGCTTAGAGCAGTCTACT
TTTTCTTTTTTGGTTCTGGGATTGAGCAGAGATCTCATGTATTGTCCTGC
TGAGGCATAGCCCTAAGGGCATCTCGTATAAACCTAGGCTGACCTGAAAC
TCACTAGGTAACCAAAAATGACCTTGAACTTCTGAATACCCCACCTGCTT
TCACGTCCAAAGAGCTGGGATTACAGACATGCGCCATCAAGCCTGTTGGG
CTGGTGTGCTTGTAAACAAACCCCCCGTTTGGCAGGCCCCTGAGCTTCTT
CCCCTGTCTCCACTCGAAAGGATGGGTAATCGTCTGGCTTCCTAACCCAG

Query= MSMg01no440_g20.g1 MSMg01no440_g20.g1 CHROMAT_FILE:
MSMg01no440_g20.g1 PHD_FILE: MSMg01no440_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:52 2005
         (522 letters)



>mm_chr5_32708429_32709350
          Length = 922

 Score =  963 bits (498), Expect = 0.0
 Identities = 516/522 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggtttggggttggccagagggaagaaaaccccagggctttgggtccagagcgggaagg 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 633 caggtttggggttggccagagggaagaaaacccaagggctttgggtccagagcgggaagg 574

                                                                       
Query: 61  ccaccacagtttgcttggggcacaaaaatagagatgttggagtcaggctttgcccaaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ccaccacagtttgcttggggcacaaaaatagagatgttggagtcaggctttgcccaaagc 514

                                                                       
Query: 121 cactattttgcttgtgagtggaccttacaatgaaatagtattagttccccaggagacata 180
           |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 513 cactattttgcttgtgcgtggaccttacaatgaaatagtattacttccccaggagacata 454

                                                                       
Query: 181 gatgcagcctcaattacagagggacagaaacttccggggctgaaagtagaaacacaaggg 240
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 453 gatgcagcctcaattacagagggacagaaacttctggggctgaaagtagaaacacaaggg 394

                                                                       
Query: 241 atgagcaaaggacagagaagtgttttacaaacagatggagcaggtgagtccccaggccag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atgagcaaaggacagagaagtgttttacaaacagatggagcaggtgagtccccaggccag 334

                                                                       
Query: 301 tggatggagccaggagaaagcagccagcagggcacagctgttgggaaggaggcttagagc 360
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 333 tggatggagccaggagaaagcagccagcagggcacaactgttgggaaggaggcttagagc 274

                                                                       
Query: 361 agtctactttttcttttttggttctgggattgagcagagatctcatgtattgtcctgctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agtctactttttcttttttggttctgggattgagcagagatctcatgtattgtcctgctg 214

                                                                       
Query: 421 aggcatagccctaagggcatctcgtataaacctaggctgacctgaaactcactaggtaac 480
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 213 aggcatagccctaagggcatcttgtataaacctaggctgacctgaaactcactaggtaac 154

                                                     
Query: 481 caaaaatgaccttgaacttctgaataccccacctgctttcac 522
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 caaaaatgaccttgaacttctgaataccccacctgctttcac 112


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space:   466944
Effective search space used:   466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)