MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-440J11
Chromosome	5 (Build37)
Map Location	124,983,036 - 124,983,526
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Vps33a, Clip1, Zcchc8, Rsrc2, Kntc1, LOC100040005, Gpr109a, Gpr81, Denr, Ccdc62, Hip1r, Vps37b, Abcb9, Ogfod2, Arl6ip4, Pitpnm2, Mphosph9, 2810006K23Rik, Cdk2ap1, Sbno1, Setd8, BC003324, LOC606492, 6330548G22Rik, 2900002H16Rik, Rpl32-ps5c
Downstream gene	Tmed2, Ddx55, Eif2b1, Gtf2h3, 4432405B04Rik, Atp6v0a2, Atp6v0a2, Dnahc10, Ccdc92, Zfp664, 3110032G18Rik, Ncor2, Scarb1, Ubc, Dhx37, Bri3bp, Aacs
Link	Open Mouse BAC browser

Click to get alignment info.

name	Vps33a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77573 MGI:1924823
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56430 MGI:1928401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zcchc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70650 MGI:1917900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rsrc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208606 MGI:1913489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Kntc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208628 MGI:2673709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Gpr109a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80885 MGI:1933383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr81 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243270 MGI:2441671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Denr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68184 MGI:1915434
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc62 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208908 MGI:2684996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins

name	Hip1r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29816 MGI:1352504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps37b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330192 MGI:1916724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56325 MGI:1861729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ogfod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66627 MGI:1913877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl6ip4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65105 MGI:1929500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pitpnm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19679 MGI:1336192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mphosph9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269702 MGI:2443138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810006K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72650 MGI:1919900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdk2ap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13445 MGI:1202069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sbno1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243272 MGI:2384298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Setd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67956 MGI:1915206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC003324 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80291 MGI:1933112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC606492 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606492
definition	gene_synonym : Ppia note : peptidylprolyl isomerase A pseudogene pseudo : _no_value

name	6330548G22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76167 MGI:1923417
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2900002H16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75695 MGI:1922945
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl32-ps5c (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:595150
definition	note : ribosomal protein L32 5C pseudogene pseudo : _no_value

name	Tmed2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56334 MGI:1929269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx55 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67848 MGI:1915098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif2b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209354 MGI:2384802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2h3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209357 MGI:1277143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4432405B04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67978 MGI:1915228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21871 MGI:104855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21871 MGI:104855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnahc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56087 MGI:1860299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 23 Proteins

name	Ccdc92 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215707 MGI:106485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp664 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269704 MGI:2442505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110032G18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73121 MGI:1920371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ncor2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20602 MGI:1337080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scarb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20778 MGI:893578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22190 MGI:98889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208144 MGI:3028576
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bri3bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76809 MGI:1924059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aacs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78894 MGI:1926144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps33a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543949 GeneID:77573 MGI:1924823
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 33A (yeast) transcript_id : NM_029929.2

name	Clip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387443 GeneID:56430 MGI:1928401
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAP-GLY domain containing linker protein 1 transcript_id : NM_019765.3

name	Zcchc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373221 GeneID:70650 MGI:1917900
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, CCHC domain containing 8 transcript_id : NM_027494.2

name	Rsrc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53988375 GeneID:208606 MGI:1913489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine/serine-rich coiled-coil 2 transcript_id : NM_001005525.1

name	Rsrc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53988371 GeneID:208606 MGI:1913489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine/serine-rich coiled-coil 2 transcript_id : NM_025438.1

name	Rsrc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53988373 GeneID:208606 MGI:1913489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine/serine-rich coiled-coil 2 transcript_id : NM_001005523.1

name	Kntc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109288013 GeneID:208628 MGI:2673709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinetochore associated 1 transcript_id : NM_001042421.1

name	Gpr109a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507639 GeneID:80885 MGI:1933383
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 109A transcript_id : NM_030701.1

name	Gpr81 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354991 GeneID:243270 MGI:2441671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 81 transcript_id : NM_175520.3

name	Denr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802753 GeneID:68184 MGI:1915434
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : density-regulated protein transcript_id : NM_026603.2

name	Ccdc62 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254563 GeneID:208908 MGI:2684996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins product : coiled-coil domain containing 62 transcript_id : XM_978048.2

name	Hip1r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789285 GeneID:29816 MGI:1352504
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : huntingtin interacting protein 1 related transcript_id : NM_145070.2

name	Vps37b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803018 GeneID:330192 MGI:1916724
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 37B (yeast) transcript_id : NM_177876.3

name	Abcb9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66932951 GeneID:56325 MGI:1861729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 9 transcript_id : NM_019875.2

name	Ogfod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374427 GeneID:66627 MGI:1913877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 2-oxoglutarate and iron-dependent oxygenase domain containing 2 transcript_id : NM_025671.2

name	Arl6ip4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892800 GeneID:65105 MGI:1929500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 6 interacting protein 4 transcript_id : NM_144509.2

name	Pitpnm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755303 GeneID:19679 MGI:1336192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol transfer protein, membrane-associated 2 transcript_id : NM_011256.1

name	Mphosph9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486760 GeneID:269702 MGI:2443138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : M-phase phosphoprotein 9 transcript_id : NM_001081323.1

name	2810006K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361775 GeneID:72650 MGI:1919900
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810006K23 gene transcript_id : NM_028310.2

name	Cdk2ap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:49355793 GeneID:13445 MGI:1202069
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDK2 (cyclin-dependent kinase 2)-associated protein 1 transcript_id : NM_013812.2

name	Sbno1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487086 GeneID:243272 MGI:2384298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sno, strawberry notch homolog 1 (Drosophila) transcript_id : NM_001081203.1

name	Setd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45580701 GeneID:67956 MGI:1915206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing (lysine methyltransferase) 8 transcript_id : NM_030241.2

name	BC003324 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385073 GeneID:80291 MGI:1933112
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003324 transcript_id : NM_030259.1

name	6330548G22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981324 GeneID:76167 MGI:1923417
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330548G22 gene transcript_id : NM_029532.2

name	2900002H16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981150 GeneID:75695 MGI:1922945
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900002H16 gene transcript_id : NM_021430.2

name	Tmed2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55742882 GeneID:56334 MGI:1929269
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24 domain trafficking protein 2 transcript_id : NM_019770.2

name	Ddx55 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922713 GeneID:67848 MGI:1915098
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 transcript_id : NM_026409.3

name	Eif2b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384946 GeneID:209354 MGI:2384802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2B, subunit 1 (alpha) transcript_id : NM_145371.3

name	Gtf2h3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340972 GeneID:209357 MGI:1277143
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor IIH, polypeptide 3 transcript_id : NM_181410.2

name	4432405B04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803008 GeneID:67978 MGI:1915228
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4432405B04 gene transcript_id : NM_026486.2

name	Atp6v0a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367040 GeneID:21871 MGI:104855
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit A2 transcript_id : NM_011596.3

name	Atp6v0a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367040 GeneID:21871 MGI:104855
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit A2 transcript_id : NM_011596.3

name	Dnahc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254592 GeneID:56087 MGI:1860299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 23 Proteins product : dynein, axonemal, heavy chain 10 transcript_id : XM_001474159.1

name	Ccdc92 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625892 GeneID:215707 MGI:106485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 92 transcript_id : NM_144819.2

name	Zfp664 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723512 GeneID:269704 MGI:2442505
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 664 transcript_id : NM_001081750.1

name	3110032G18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358197 GeneID:73121 MGI:1920371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110032G18 gene transcript_id : NM_028443.2

name	Ncor2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226234 GeneID:20602 MGI:1337080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor co-repressor 2 transcript_id : NM_011424.2

name	Scarb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14389422 GeneID:20778 MGI:893578
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : scavenger receptor class B, member 1 transcript_id : NM_016741.1

name	Ubc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254583 GeneID:22190 MGI:98889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin C transcript_id : XM_001471699.1

name	Dhx37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42600570 GeneID:208144 MGI:3028576
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 37 transcript_id : NM_203319.1

name	Bri3bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79749982 GeneID:76809 MGI:1924059
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bri3 binding protein transcript_id : NM_029752.2

name	Aacs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313519 GeneID:78894 MGI:1926144
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetoacetyl-CoA synthetase transcript_id : NM_030210.1

name	Vps33a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543950 CCDS:CCDS19666.1 GeneID:77573 MGI:1924823
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0030220 - platelet formation [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0048070 - regulation of developmental pigmentation [Evidence IMP]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence ISS] [Evidence IEA] codon_start : 1 exception : mismatches in translation note : buff product : vacuolar sorting protein 33a protein_id : NP_084205.2

name	Clip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23821025 CCDS:CCDS19667.1 GeneID:56430 MGI:1928401
definition	GO_component : GO:0005881 - cytoplasmic microtubule [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005882 - intermediate filament [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0008017 - microtubule binding [Evidence IDA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : cytoplasmic linker protein 50; Reed-Steinberg cell-espressed intermediate filament-associated protein; restin (Reed-Steinberg cell-expressed intermediate filament-associated protein) product : restin protein_id : NP_062739.2

name	Zcchc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229106 GeneID:70650 MGI:1917900
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger, CCHC domain containing 8 protein_id : NP_081770.2

name	Rsrc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53988376 GeneID:208606 MGI:1913489
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : arginine/serine-rich coiled-coil 2 isoform 1 protein_id : NP_001005525.1

name	Rsrc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53988372 GeneID:208606 MGI:1913489
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : arginine/serine-rich coiled-coil 2 isoform 2 protein_id : NP_079714.1

name	Rsrc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53988374 GeneID:208606 MGI:1913489
definition	codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : arginine/serine-rich coiled-coil 2 isoform 3 protein_id : NP_001005523.1

name	Kntc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109288014 GeneID:208628 MGI:2673709
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 product : kinetochore associated 1 protein_id : NP_001035886.1

name	Gpr109a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507640 CCDS:CCDS19668.1 GeneID:80885 MGI:1933383
definition	GO_component : GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IDA]; GO:0001614 - purinergic nucleotide receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : putative seven transmembrane spanning receptor; interferon-gamma inducible gene, Puma-g product : G protein-coupled receptor 109B protein_id : NP_109626.1

name	Gpr81 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202061 CCDS:CCDS19669.1 GeneID:243270 MGI:2441671
definition	GO_function : GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 81 protein_id : NP_780729.1

name	Denr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386092 GeneID:68184 MGI:1915434
definition	GO_function : GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006413 - translational initiation [Evidence IEA] codon_start : 1 product : density-regulated protein protein_id : NP_080879.1

name	Ccdc62 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254564 GeneID:208908 MGI:2684996
definition	codon_start : 1 product : similar to aaa-protein protein_id : XP_983142.2

name	Hip1r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789286 GeneID:29816 MGI:1352504
definition	GO_component : GO:0005905 - coated pit [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0005543 - phospholipid binding [Evidence IEA] GO_process : GO:0006898 - receptor mediated endocytosis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : huntingtin interacting protein 1 related protein_id : NP_659507.2

name	Vps37b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244484 CCDS:CCDS19670.1 GeneID:330192 MGI:1916724
definition	codon_start : 1 product : vacuolar protein sorting 37B protein_id : NP_808544.1

name	Abcb9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66932952 CCDS:CCDS19671.1 GeneID:56325 MGI:1861729
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0005764 - lysosome [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015198 - oligopeptide transporter activity [Evidence IEA] GO_process : GO:0006857 - oligopeptide transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP-binding cassette, sub-family B, member 9 protein_id : NP_063928.2

name	Ogfod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313390 CCDS:CCDS19672.1 GeneID:66627 MGI:1913877
definition	GO_function : GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA] codon_start : 1 product : 2-oxoglutarate and iron-dependent oxygenase domain containing 2 protein_id : NP_079947.1

name	Arl6ip4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362283 CCDS:CCDS19673.1 GeneID:65105 MGI:1929500
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : SRp25 nuclear protein; ADP-ribosylation-like factor 6 interacting protein 4 product : ADP-ribosylation factor-like 6 interacting protein 4 protein_id : NP_653092.1

name	Pitpnm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755304 CCDS:CCDS19674.1 GeneID:19679 MGI:1336192
definition	GO_component : GO:0005622 - intracellular [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005543 - phospholipid binding [Evidence ISS] codon_start : 1 product : retinal degeneration B2 homolog protein_id : NP_035386.1

name	Mphosph9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486761 GeneID:269702 MGI:2443138
definition	codon_start : 1 product : M-phase phosphoprotein 9 protein_id : NP_001074792.1

name	2810006K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859720 GeneID:72650 MGI:1919900
definition	codon_start : 1 product : hypothetical protein LOC72650 protein_id : NP_082586.1

name	Cdk2ap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49355794 GeneID:13445 MGI:1202069
definition	GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : deleted in oral cancer 1 product : CDK2 (cyclin-dependent kinase 2)-associated protein 1 protein_id : NP_038840.2

name	Sbno1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487087 GeneID:243272 MGI:2384298
definition	codon_start : 1 product : sno, strawberry notch homolog 1 protein_id : NP_001074672.1

name	Setd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45580702 CCDS:CCDS19675.1 GeneID:67956 MGI:1915206
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0018024 - histone-lysine N-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA] codon_start : 1 product : SET domain-containing protein protein_id : NP_084517.2

name	BC003324 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385074 CCDS:CCDS19676.1 GeneID:80291 MGI:1933112
definition	codon_start : 1 product : hypothetical protein LOC80291 protein_id : NP_084535.1

name	6330548G22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21624627 CCDS:CCDS19677.1 GeneID:76167 MGI:1923417
definition	GO_component : GO:0005689 - minor (U12-dependent) spliceosome complex [Evidence ISS] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008380 - RNA splicing [Evidence ISS] codon_start : 1 product : U11/U12 snRNP 35K protein_id : NP_083808.1

name	2900002H16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946796 CCDS:CCDS19678.1 GeneID:75695 MGI:1922945
definition	codon_start : 1 product : hypothetical protein LOC75695 protein_id : NP_067405.1

name	Tmed2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790015 CCDS:CCDS19679.1 GeneID:56334 MGI:1929269
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS] [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence ISS]; GO:0042589 - zymogen granule membrane [Evidence ISS] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006903 - vesicle targeting [Evidence ISS] codon_start : 1 note : Sid394p product : coated vesicle membrane protein protein_id : NP_062744.1

name	Ddx55 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647283 GeneID:67848 MGI:1915098
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 protein_id : NP_080685.2

name	Eif2b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703744 GeneID:209354 MGI:2384802
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005851 - eukaryotic translation initiation factor 2B complex [Evidence ISS]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0044249 - cellular biosynthesis [Evidence IEA] codon_start : 1 note : eukaryotic translation initiation factor 2B, subunit 1 (alpha, 26kDa) product : eukaryotic translation initiation factor 2B, subunit 1 protein_id : NP_663346.1

name	Gtf2h3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088894 CCDS:CCDS19680.1 GeneID:209357 MGI:1277143
definition	GO_function : GO:0003684 - damaged DNA binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006289 - nucleotide-excision repair [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : general transcription factor IIH, polypeptide 3, 34kDa product : general transcription factor IIH, polypeptide 3 protein_id : NP_852075.1

name	4432405B04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385970 GeneID:67978 MGI:1915228
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : tectonic 2 protein_id : NP_080762.1

name	Atp6v0a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83627707 GeneID:21871 MGI:104855
definition	GO_component : GO:0001669 - acrosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : T-cell expressing clone j6; V-ATPase a2; ATPase, H+ transporting, lysosomal V0 subunit a; ATPase, H+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 2 (38kD) product : ATPase, H+ transporting, lysosomal V0 subunit A2 protein_id : NP_035726.2

name	Atp6v0a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83627707 GeneID:21871 MGI:104855
definition	GO_component : GO:0001669 - acrosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : T-cell expressing clone j6; V-ATPase a2; ATPase, H+ transporting, lysosomal V0 subunit a; ATPase, H+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 2 (38kD) product : ATPase, H+ transporting, lysosomal V0 subunit A2 protein_id : NP_035726.2

name	Dnahc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254593 GeneID:56087 MGI:1860299
definition	codon_start : 1 product : dynein, axonemal, heavy chain 10 protein_id : XP_001474209.1

name	Ccdc92 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450195 CCDS:CCDS19681.1 GeneID:215707 MGI:106485
definition	codon_start : 1 product : coiled-coil domain containing 92 protein_id : NP_659068.1

name	Zfp664 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723513 GeneID:269704 MGI:2442505
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein ZFOC1 product : zinc finger protein 664 protein_id : NP_001075219.1

name	3110032G18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348700 CCDS:CCDS19682.1 GeneID:73121 MGI:1920371
definition	codon_start : 1 product : hypothetical protein LOC73121 protein_id : NP_082719.1

name	Ncor2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226235 GeneID:20602 MGI:1337080
definition	GO_component : GO:0016604 - nuclear body [Evidence IDA]; GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP]; GO:0016564 - transcriptional repressor activity [Evidence IMP] GO_process : GO:0016481 - negative regulation of transcription [Evidence IMP]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : silencing mediator of retinoid acid and thyroid hormone receptor product : nuclear receptor co-repressor 2 protein_id : NP_035554.2

name	Scarb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14389423 CCDS:CCDS19683.1 GeneID:20778 MGI:893578
definition	GO_component : GO:0016599 - caveolar membrane [Evidence IDA]; GO:0000299 - integral to membrane of membrane fraction [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : scavenger receptor class B type I; scavenger receptor class B1 product : scavenger receptor class B, member 1 protein_id : NP_058021.1

name	Ubc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254584 GeneID:22190 MGI:98889
definition	codon_start : 1 exception : unclassified translation discrepancy product : ubiquitin C protein_id : XP_001471749.1

name	Dhx37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42600571 CCDS:CCDS19685.1 GeneID:208144 MGI:3028576
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : DEAH (Asp-Glu-Ala-His) box polypeptide 37 protein_id : NP_976064.1

name	Bri3bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037467 CCDS:CCDS19686.1 GeneID:76809 MGI:1924059
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : Bri3 binding protein protein_id : NP_084028.1

name	Aacs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313520 CCDS:CCDS19687.1 GeneID:78894 MGI:1926144
definition	GO_function : GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA] codon_start : 1 product : acetoacetyl-CoA synthetase protein_id : NP_084486.1

name	LOC100040005 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040005
definition	number : 4 pseudo : _no_value

name	LOC100040005 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040005
definition	number : 3 pseudo : _no_value

name	LOC100040005 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040005
definition	number : 2 pseudo : _no_value

name	LOC100040005 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040005
definition	number : 1 pseudo : _no_value

clone name	MSMg01-105N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296M04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-126L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-440J11.T7 (MSMg01no440_j11.b1)	MSMg01-440J11.TJ (MSMg01no440_j11.g1)
ACC	AG530672	AG530673
length	772	752
length of high quality (start - end)	494 (54 - 547)	474 (80 - 553)
definition	CHROMAT_FILE: MSMg01no440_j11.b1 PHD_FILE: MSMg01no440_j11.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:07:05 2005	CHROMAT_FILE: MSMg01no440_j11.g1 PHD_FILE: MSMg01no440_j11.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:07:06 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAA TCCGCGGAATTCAAGACTTCTGCCCGCTCTGGCCCTGTTCACTCCACAGG CCTCCCTTGCTCCAGCCCAAAGATTTCTTTATTATTATATGTAAGTACAT TATAGCTGTCTTCAGACATACCAGAAAAGGGCATCAAATCTCATTAGGGA TGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGG AAGAGCAGTCAGTGCTCTTAACTGCTGAACCATCTCTCCAGCCCCCAAAG TGTCTTTAAAGTGTGCATGTGTATATAAACCATGCACCTGCTCAGAAAGG TAAACATGTGCTCCCACAGTTGAGGAGGGATACATCAAAAGTGACCCAAG GTGGTTTCAGCAGCGGATCTAGCCTCACTTACACCTAGCTGGGTGGAGTG ATCAGAGGTGGCTTCCTGGAGGAGGAGGGCCTAAGGTACAGAGTGAAAGG CAGAGGTCATAAGCACCTGTGAAGTTTGTGCGTGGGCTGTGCCATGTGTT CATCTGTAAGCTTAGAAGGAGCCCGGGTAGGCTGGGGGTAAATGTAAATG GATTTGAAAGGGGATTATCTTATTAAGCCCTTCTTCCAAACAGTGGTAGC TGGCTTTGGGCGGCACTCCCCCCGTCATTGTTTTTCGGTTTAACAGTGTA TCTCGGCTTCCCCTCTTATGTGTTTATCTCTTTGTATCTTCCCTGTTTAC TCTTTTGTATTTCCGTTTGGTT	NNCCCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTACACCTGTAGAGAAGGA CGAGAGTTACATGTGTCAGCCCCAAAGCACGGAAGTACCTCAAGGGCCAC TGAGATGGCTTCACAGATAAAGGAGCTTGCCACCAAGCCTGACCATCTGA GTTCAGTCCTCATGAACCCATGTAGTAAAGAGGGCCAACTTCTGCAAGTT GTCCTCTGACTTCCACAGGGGCACCATAGAAAACACACACACACATACAC ACAGCATAATGCTATTGTATATTGTGTATTTTTTTATCCTGGGACTATTC AAATGCTGATTTCTGGTGTCTGAGCCCCCGTATCTGGTTGCGATTTCAAT ATTGTATAAACATTCCTGCCCAACTATTCCCTGGTTGGTCAATAAAGCTA GCTGATCAGGCAAGGACTGAGTAGGGGAGATAGACTAGGGATGGACTTCC TGCCAGCCAGGGAAGGAGGAGAAAGAAACAGGAAGGGGGATTAGCTACAG GACAAGTCCAGGGGATGTCATGACAAAATATCAGGGACAGAGAGAGAGCT AGATCAGTATTTAAACTGCAATATTCTGGGGATTTTTGGACTGGCAAGCA GCAAGATTAACCTAAAGGTATATTTCTCAATAGTACTGTTCTGTTGTTTG CGCCCTTGAAGCTTGGTTACGTTAAAATTCATATTCCGTCCACTTATTTT TT
quality values	Open. Hide. 0 0 0 0 3 6 6 8 11 12 12 12 19 24 32 34 34 28 28 13 13 12 27 15 17 17 22 25 25 30 39 47 28 28 28 28 27 21 23 9 9 9 12 9 9 9 9 9 9 9 9 12 13 15 28 28 30 30 26 26 30 30 33 33 30 39 25 21 7 7 7 7 7 12 11 20 20 25 34 28 28 23 31 39 43 57 57 53 53 53 53 53 53 53 47 47 50 42 42 40 57 57 68 68 68 68 68 68 68 68 51 51 50 50 50 50 68 68 68 68 51 51 50 50 50 50 68 68 68 68 68 68 68 57 57 54 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 59 68 68 68 57 57 57 57 57 57 57 59 68 57 57 57 57 57 57 68 68 57 57 68 68 68 68 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 54 57 57 48 48 48 48 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 30 21 12 11 12 12 12 11 11 11 12 24 30 47 47 47 47 48 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 57 59 54 54 54 59 48 57 48 57 57 57 59 54 54 54 68 68 57 57 43 43 43 47 47 57 57 57 57 57 57 57 57 57 57 59 59 57 48 48 48 48 48 57 48 48 59 59 48 48 47 59 59 59 59 22 17 8 8 6 8 8 10 10 15 15 23 24 28 37 37 37 28 28 41 41 59 47 43 41 37 37 41 41 41 41 46 46 46 48 48 48 48 48 48 48 48 48 57 59 59 59 59 43 47 43 43 43 43 43 43 37 37 30 30 30 37 34 37 31 25 31 37 39 39 39 40 46 47 46 41 41 41 32 29 27 32 36 30 32 34 34 37 30 30 25 28 22 13 13 15 22 30 34 32 37 30 28 28 32 23 27 28 28 28 21 24 16 15 12 15 21 17 19 19 34 21 29 22 28 28 23 25 15 15 11 16 11 13 18 26 19 13 10 10 8 8 8 10 9 9 9 9 9 9 9 9 9 11 8 8 8 9 9 9 10 12 12 9 8 8 8 8 9 10 8 6 8 6 7 10 8 12 13 17 15 13 13 11 11 11 11 12 20 18 18 10 11 10 10 10 15 10 11 10 10 8 8 8 8 8 8 8 8 8 15 17 18 12 12 9 9 11 11 11 10 11 9 9 9 9 9 10 9 9 9 10 8 9 10 10 13 9 10 10 12 13 12 15 12 11 11 13 10 12 9 9 10 9 9 8 8 8 6 6 6 8 8 10 10 10 8 8 6 6 8 8 10 8 6 6 6 8 8 8 8 8 10 10 10 10 10 11 11 10 12 9 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 6 6 8 8 10 8 9 9 11 10 11 11 9 9 9 9 8 8 8 8 8 8 8 10 6 6 6 10 10 8 8 8 8 13 12 12 12 12 12	Open. Hide. 0 0 3 6 6 6 8 10 15 8 8 8 8 9 14 14 12 9 9 9 14 27 34 43 37 37 37 37 37 31 37 44 44 37 23 18 9 9 9 8 8 3 0 3 10 13 11 24 18 22 30 30 41 47 39 39 47 44 59 50 50 47 27 27 12 9 7 7 8 8 7 7 7 8 10 21 21 28 33 43 48 50 47 53 50 50 50 53 59 59 59 59 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 57 44 44 37 35 35 37 44 44 48 47 57 57 57 57 68 68 68 57 57 57 57 57 57 57 57 57 54 57 57 57 57 57 48 48 41 50 50 50 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 48 48 48 48 57 57 54 57 57 57 59 68 68 68 57 57 57 68 57 59 59 59 59 57 57 68 57 57 57 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 57 57 57 57 57 53 59 50 50 50 47 47 36 36 20 11 8 8 8 8 8 11 11 11 15 23 30 41 41 59 47 48 48 50 50 50 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 68 68 59 59 57 57 48 48 47 47 43 43 43 59 59 46 46 43 43 48 48 68 59 59 59 59 59 59 57 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 32 32 15 13 13 26 34 57 59 59 59 47 43 41 59 59 59 57 57 57 68 68 68 68 68 59 59 59 59 57 57 57 54 48 48 46 43 43 44 44 57 57 46 46 46 47 47 46 46 54 48 48 59 59 59 43 43 39 42 39 47 42 42 48 43 43 37 37 36 39 43 43 43 48 48 40 41 41 41 39 39 35 28 23 21 21 16 15 21 24 39 39 32 35 35 37 37 30 30 25 28 28 34 34 36 29 29 32 34 28 28 28 28 28 28 19 19 19 19 19 26 32 28 30 35 32 32 19 17 20 25 23 21 15 18 20 21 21 23 23 19 23 17 17 15 26 14 14 14 26 24 39 26 22 22 22 22 22 17 19 15 12 8 8 8 8 8 8 8 8 8 8 8 8 14 23 22 25 24 19 16 14 15 19 21 22 28 22 15 15 11 11 15 17 8 7 6 12 8 8 6 6 8 8 10 10 14 10 9 8 8 9 12 10 26 26 19 12 8 8 8 9 9 9 11 10 10 8 8 8 8 8 8 8 8 10 12 14 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 10 10 8 6 6 8 8 9 9 9 9 10 10 15 11 10 10 10 10 9 9 10 6 6 6 10 6 6 8 8 13 10 8 8 10 6 6 6 6 8 8 8 8 8 8 8 9 9 8 8 6 7 8 8 9 13 10 16 16 15

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no440_j11.b1 MSMg01no440_j11.b1 CHROMAT_FILE:
MSMg01no440_j11.b1 PHD_FILE: MSMg01no440_j11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:05 2005
         (494 letters)



>mm_chr5_124982833_124983726
          Length = 894

 Score =  880 bits (455), Expect = 0.0
 Identities = 482/491 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcaagacttctgcccgctctggccctgttcactccacaggcctcccttgctccagc 63
           ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaagacctctgctcgctctggccctgttcactccacaggcctcccttgctccagc 263

                                                                       
Query: 64  ccaaagatttctttattattatatgtaagtacattatagctgtcttcagacataccagaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccaaagatttctttattattatatgtaagtacattatagctgtcttcagacataccagaa 323

                                                                       
Query: 124 aagggcatcaaatctcattagggatggttgtgagccaccatgtggttgctgggatttgaa 183
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 324 aagggcatcaaatctcattagggatggttgtaagccaccatgtggttgctgggatttgaa 383

                                                                       
Query: 184 ctcaggaccttcggaagagcagtcagtgctcttaactgctgaaccatctctccagccccc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcaggaccttcggaagagcagtcagtgctcttaactgctgaaccatctctccagccccc 443

                                                                       
Query: 244 aaagtgtctttaaagtgtgcatgtgtatataaaccatgcacctgctcagaaaggtaaaca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagtgtctttaaagtgtgcatgtgtatataaaccatgcacctgctcagaaaggtaaaca 503

                                                                       
Query: 304 tgtgctcccacagttgaggagggatacatcaaaagtgacccaaggtggtttcagcagcgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 504 tgtgctcccacagttgaggagggatacatcaaaagtgacccaaggtggtttcagcaatgg 563

                                                                       
Query: 364 atctagcctcacttacacctagctgggtggagtgatcagaggtggcttcctggaggagga 423
           |||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 564 atctagtcttacttacacctagctgggtggagtgatcagaggtgacttcctggaggagga 623

                                                                       
Query: 424 gggcctaaggtacagagtgaaaggcagaggtcataagcacctgtgaagtttgtgcgtggg 483
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gggcctcaggtacagagtgaaaggcagaggtcataagcacctgtgaagtttgtgcgtggg 683

                      
Query: 484 ctgtgccatgt 494
           |||||||||||
Sbjct: 684 ctgtgccatgt 694


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information