Query= MSMg01no441_g14.b1 MSMg01no441_g14.b1 CHROMAT_FILE:
MSMg01no441_g14.b1 PHD_FILE: MSMg01no441_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:11 2005
(542 letters)
>mm_chr5_140593927_140594868
Length = 942
Score = 654 bits (338), Expect = 0.0
Identities = 370/388 (95%), Gaps = 14/388 (3%)
Strand = Plus / Minus
Query: 161 ggagtcacagaaaaccttgatgaggccagcaaggtggttcaacaggtaaaggcaccgaac 220
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 942 ggagtcacagaaaaccttgatgaggccagcaaggtggttcagcaggtaaaggcactgaac 883
Query: 221 aaacctgacaacctgagtttcatctcca------ttttttatatggtgggaggatagaac 274
||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 882 aaacctgacaacccgagtttcatctccaggaccc------atatggtgggaggatagaac 829
Query: 275 caatttctgcaagttgtcctcgacctacacccacactttggctacatgtgcatttgcatg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 828 caatttctgcaagttgtcctcgacctacacccacactttggctacatgtgcatttacatg 769
Query: 335 cgtgaacgtgtgcacacacacacacacacctctcttactatagcagcatgcaacaggccc 394
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 cgtgaacgtgtg--cacacacacacacacctctcttactatagcagcatgcaacaggccc 711
Query: 395 tgcagccttgccacctcctccaacaatatgcaacaggaaatttgctgggatctgtccagc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tgcagccttgccacctcctccaacaatatgcaacaggaaatttgctgggatctgtccagc 651
Query: 455 acagccagtttcaggggccattctatcagattctcaaagctgtgagacctgccacagcac 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 acagccagtttcaggggccattctatcagattctcaaagctgtgagacctgccacagcac 591
Query: 515 ataaactacatcagagtgtggaagcaag 542
||||||||||||||||||||||||||||
Sbjct: 590 ataaactacatcagagtgtggaagcaag 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_g14.g1 MSMg01no441_g14.g1 CHROMAT_FILE:
MSMg01no441_g14.g1 PHD_FILE: MSMg01no441_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:11 2005
(497 letters)
>mm_chr5_140431938_140432834
Length = 897
Score = 938 bits (485), Expect = 0.0
Identities = 494/497 (99%)
Strand = Plus / Plus
Query: 1 actttgtagaccaggctggccttgaactcagaaatccgcctgcctctgcatcccaagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 actttgtagaccaggctggccttgaactcagaaatccgcctgcctctgcctcccaagggc 260
Query: 61 tgggattaaaggcgtgcgccaccacactcggctacagcctgatcttatggagacattttc 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaaggcgtgcgccaccacgctcggctacagcctgatcttatggagacattttc 320
Query: 121 tccatcgaggcttcctctgctgcgatgactcttcctgtgtcaagttgacacaaaactagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccatcgaggcttcctctgctgcgatgactcttcctgtgtcaagttgacacaaaactagt 380
Query: 181 atatagacagagcaccatctcctgttctgctcaggatgtctctatgacatcaactgagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatagacagagcaccatctcctgttctgctcaggatgtctctatgacatcaactgagta 440
Query: 241 tgcttcttgaagttcgtcttctgtctttctgttccctgcatgtggcatgggggccacact 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcatcttgaagttcgtcttctgtctttctgttccctgcatgtggcatgggggccacact 500
Query: 301 tctctgcccacttgtggagcaagttttgttgtgcccgaggacttgagccactaatccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctctgcccacttgtggagcaagttttgttgtgcccgaggacttgagccactaatccttt 560
Query: 361 tggaaggaatatcaccataggatcttcaagcttgttacagtgtgcctgggtggggacagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggaaggaatatcaccataggatcttcaagcttgttacagtgtgcctgggtggggacagc 620
Query: 421 acccacagtctgctcctagagtcatcaggccaaagagagcgcaagttggggtctgggagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acccacagtctgctcctagagtcatcaggccaaagagagcgcaagttggggtctgggagg 680
Query: 481 ctctccagggtcttcca 497
|||||||||||||||||
Sbjct: 681 ctctccagggtcttcca 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
