Query= MSMg01no444_b07.b1 MSMg01no444_b07.b1 CHROMAT_FILE:
MSMg01no444_b07.b1 PHD_FILE: MSMg01no444_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:52 2005
(219 letters)
>mm_chr5_144433308_144433925
Length = 618
Score = 416 bits (215), Expect = e-121
Identities = 218/219 (99%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 1 tcagagaatgtggtcttcccatgaaagccaaggaataaagcactgtgattgacttagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagagaatgtggtcttcccatgaaagccaaggaataaagcactgtgattgacttagcag 260
Query: 61 gaatggatggtgtgctatgaggaataatgggctgctcactatgtgggacggctagaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatggatggtgtgctatgaggaataatgggctgctcactatgtgggacggctagaagag 320
Query: 121 agagctcacctctgtggccatgcctggaatcattcagttccagactcacctatcgggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 agagctcacctctgtggccatgcctggaatcattcagttccagactcacctatcggg-ga 379
Query: 181 caggtggagcctgaattaggagatggccatggctgcagt 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caggtggagcctgaattaggagatggccatggctgcagt 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 618
Length adjustment: 9
Effective length of query: 210
Effective length of database: 609
Effective search space: 127890
Effective search space used: 127890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_b07.g1 MSMg01no444_b07.g1 CHROMAT_FILE:
MSMg01no444_b07.g1 PHD_FILE: MSMg01no444_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:52 2005
(373 letters)
>mm_chr5_144580401_144581173
Length = 773
Score = 613 bits (317), Expect = e-180
Identities = 355/373 (95%), Gaps = 10/373 (2%)
Strand = Plus / Minus
Query: 1 aatgggcaacttaatgacagcctgaacaacgttaacaacgttagcggagtggagcgacgg 60
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 470 aatgggcaacttaatgacaccctgaacaacgttaacaacgttagcggagcggagc----- 416
Query: 61 gggagaagctcagctgcggggcacttgacgagcattcacaagatcctagctcaatccccg 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 415 ---agaagctcagctgcggggcacttgacgagcgttcacaagatcctagctcaatccccg 359
Query: 121 gcttaacaaataaataaagtattgttattgtattattttgtttttagacaggttgaagga 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 358 gcttaacaaataaataaagtattgttactgtattattttgtttttagacaggttgaagga 299
Query: 181 ttattctaaggtaatacttttgaaacactggtgacagctgggcgtggtggcgcacgcctt 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ttaatctaaggtaatacttttgaaacactggtgacagctgggcgtggtggcgcacgcctt 239
Query: 241 tgatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtc 300
||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 238 tgatcccagcacttgggaggcagaagcaggtggatttctgagttcgaggccagcctggtc 179
Query: 301 tacagagtgagttcccggacagccggggctacacagagaaaccctgtctcaaaaaaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tacagagtgagttcccggacagccggggctacacagagaaaccctgtctcaaaaaaaaaa 119
Query: 361 aaaaaactaaaaa 373
|||||| |||||
Sbjct: 118 aaaaaa--aaaaa 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
