Query= MSMg01no444_f11.b1 MSMg01no444_f11.b1 CHROMAT_FILE:
MSMg01no444_f11.b1 PHD_FILE: MSMg01no444_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:13 2005
(191 letters)
>mm_chr5_44718366_44718955
Length = 590
Score = 354 bits (183), Expect = e-102
Identities = 186/187 (99%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 1 aacaaccatgctttgctggtgttagcttaaacaccatctcttcagtgaaatccagggtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaaccatgctttgctggtgttagcttaaacaccatctcttcagtgaaatccagggtca 260
Query: 61 agtagattattttctattagcccaaatgatactctctgctgtcttactgtctggagtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtagattattttctattagcccaaatgatactctctgctgtcttactgtctggagtctc 320
Query: 121 tttccatgaccagtgactactttgcaaggcacttcggtttgctacacaggaaaatgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tttccatgaccagtgactactttgcaaggcacttcggtttgctacacaggaaa-tgtctt 379
Query: 181 cacccag 187
|||||||
Sbjct: 380 cacccag 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 590
Length adjustment: 8
Effective length of query: 183
Effective length of database: 582
Effective search space: 106506
Effective search space used: 106506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_f11.g1 MSMg01no444_f11.g1 CHROMAT_FILE:
MSMg01no444_f11.g1 PHD_FILE: MSMg01no444_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:13 2005
(238 letters)
>mm_chr5_44878954_44879591
Length = 638
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%)
Strand = Plus / Minus
Query: 1 tctgcataactcagacctaaagttccatgaacatacctcactttggtctccaatagacca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 431 tctgcataactcagacctaaagttccatgaacacacctcactttggtctccaatagacca 372
Query: 61 atccttacctgaagtcagttagcaaatagcatgcaggatctattcccttgttgctgatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atccttacctgaagtcagttagcaaatagcatgcaggatctattcccttgttgctgatgc 312
Query: 121 agagctagaagacagaacactaaatgcagtaggaaggcaacctgaacactgtgtagggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 agagctagaagacagaacactaaatgcagtaggaaggcaacctgaacactgtggagggtt 252
Query: 181 tgtctatgccaaaaatattctgcagataaattataatcatgtgaggggggg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgtctatgccaaaaatattctgcagataaattataatcatgtgaggggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
