TTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCC
GCGGAATTCCTCATGGCTTGCCTCAGCCCATCAGGTACTAATCTCCCCCA
TACTGTCTTAGGCCATGCAGCTTTGCTTAAGGATAAATAGGAAGTTATGT
TACTGAGTTTTCTGCCTCTACAACACTCAGACTGATCCCATCCACTTCCC
TAATTTCAGCCATTCAAATGCTGAATATGTCCTGATTACTGGAGTTTCTT
GTTTCTGACCATTGTTAAGGTTCCAATATGTACCTTGAATTGCACAGTTT
TTTCTATTAAAGTTCACACCACATTTTTATGCGCTATCATCTTTATCCCC
ACTCTCCCATTTTTATATAATTCATTTGCCTAACCAGAATCCATTGTGAA
GGATGCTACTAGCTACATTTCCAGTCCTTGTTGCAATTGCTCTTTTGTAT
TACTAAGTTTCTACTATACACAAGCAAGTGCCTACTTGGAGGCCATCTCA
GCCTCAGATGCACAAGGTACTGGCCAGTAACTTCTGTTGTTGCTGCTGCT
GCTTGCANAAGATCTCAATCCTGGCGCACTAATATCAAAGTCTGCCCAAT
TCCCTATAAACACCCGGAATGTTTACCCGACGACCGCCCCTTTGTTCTTC
CCCTTATGTTCCCCTCCCCTCCCTACCTGGCCGCTTTTCCTGGATGCTCT
CATCTCGGGAAAAACCTTCCGCCCCGTTCTTGTCTTGTTTCCCCCCT

GATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTAATTACTCACCATTTCT
AGAGACGTTAAGAAACTTAGATAGGAATCAATACAAATGGCACTTAAAAG
AACAAGTCAGCCAAATGTGGTAAAAATAATGTCAAGCTTTGGTAGATTTC
AGGAATCATAAAGGAAGACATTATTGGGAAACAGATTAAGAGCCAGGACC
CTGGACAGACCTGACTGTGTAGTCCTGTTTTCTTGTTGGTTGCAGCACCT
GTTTTAAAGTAGGTAGCTTTGCTCTGGGTTATCCTTTTCATGTTCTGACT
TAATGATCTAGTCCTCTTCTTACCTCAACACAAGTAAAGAAGAATGAAAC
GTCTACTCTTTTATTTTAAATTGTCTTTGACTCTTACAGTGAGCATCTGT
GGAGGGAGCTCACAAAGAAAACAGAACTACAGAGCTAATTATTGATTCCT
TCTTACATATTTTATCTTGGACAATGATCCTTCCTAGTGCATCTAGCTTT
AGAGATATTTCTAGTTTAAAGGTAACAGTAAAGAGGCTCAGAGAAAGAGG
GGACTGCATAAGGTCATTGCTTTGCAAGTTAAGAGCATGTATCTAGAACC
AGTCTTATTTGATTATAAAATCTGCCTCTTGCTATACAAATTTTATTCAA
AGATGTTCACTAGAGTCAATGATTTTAGCATTGTAACTTATTTACCAGAT
ATCN

Query= MSMg01no444_f19.g1 MSMg01no444_f19.g1 CHROMAT_FILE:
MSMg01no444_f19.g1 PHD_FILE: MSMg01no444_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:14 2005
         (599 letters)



>mm_chr5_78771522_78772524
          Length = 1003

 Score = 1079 bits (558), Expect = 0.0
 Identities = 588/600 (98%), Gaps = 4/600 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttaattactcaccatttctagagacgttaagaaacttagataggaatcaatacaaatg 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 acttaattactcaccatttctagagatgttaagaaacttagataggaatcaatacaaatg 260

                                                                       
Query: 61  gcacttaaaagaacaagtcagccaaatgtggtaaaaataatgtcaagctttggtagattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacttaaaagaacaagtcagccaaatgtggtaaaaataatgtcaagctttggtagattt 320

                                                                       
Query: 121 caggaatcataaaggaagacattattgggaaacagattaagagccaggaccctggacaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 321 caggaatcataaaggaagacattattgggaaacagattaagagccaggaacctggaccga 380

                                                                       
Query: 181 cctgactgtgtagtcctgttttcttgttggttgcagcacctgttttaaagtaggtagctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgactgtgtagtcctgttttcttgttggttgcagcacctgttttaaagtaggtagctt 440

                                                                       
Query: 241 tgctctgggttatccttttcatgttctgacttaatgatctagtcctcttcttacctcaac 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctctgggttatctttttcatgttctgacttaatgatctagtcctcttcttacctcaac 500

                                                                       
Query: 301 acaagtaaagaagaatgaaacgtctactcttttattttaaattgtctttgactcttacag 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 acaagtaaagaagaatgaaacgtctactcttttattttaaattgcctttgactcttacag 560

                                                                       
Query: 361 tgagcatctgtggagggagctcacaaagaaaacagaactacagagctaattattgattcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagcatctgtggagggagctcacaaagaaaacagaactacagagctaattattgattcc 620

                                                                       
Query: 421 ttcttacatattttatcttggacaatgatccttcctagtgcatctagctttagagatatt 480
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcttacatattttatcttggaaaatgatccttcctagtgcatctagctttagagatatt 680

                                                                       
Query: 481 tctagtttaaaggtaaca----gtaaagaggctcagagaaagaggggactgcataaggtc 536
           |||||||||||| |||||    |||||||||| |||||||||||||||||||||||||||
Sbjct: 681 tctagtttaaagataacaaacagtaaagaggcccagagaaagaggggactgcataaggtc 740

                                                                       
Query: 537 attgctttgcaagttaagagcatgtatctagaaccagtcttatttgattataaaatctgc 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attgctttgcaagttaagagcatgtatctagaaccagtcttatttgattataaaatctgc 800


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1003
Length adjustment: 10
Effective length of query: 589
Effective length of database: 993
Effective search space:   584877
Effective search space used:   584877
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)