Query= MSMg01no445_o15.b1 MSMg01no445_o15.b1 CHROMAT_FILE:
MSMg01no445_o15.b1 PHD_FILE: MSMg01no445_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:17 2005
(503 letters)
>mm_chr5_48451988_48452890
Length = 903
Score = 880 bits (455), Expect = 0.0
Identities = 491/503 (97%), Gaps = 1/503 (0%)
Strand = Plus / Plus
Query: 1 gacctggtagacaaaagggagcttagccattaggcaagtagtgaaggttggaaatcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacctggtagacaaaagggagcttagccattaggcaagtagtgaaggttggaaatcttca 260
Query: 61 accatgcatttcttcattcaaaaaatattatggagtgttaactgtacgtctggattaata 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 accatgcatttcttcattcaaaatatattatggagtgttaactgtacgtctggattaata 320
Query: 121 ggcagtattagcaaagtgcatataaggaagaaaagaaagaaactacttcttagcttataa 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagtattagcaaagggcatataaggaagaaaagaaagaaactacttcttagcttataa 380
Query: 181 tccaaataaggagacacatttgtaaaaacaatgcaataaaattagatttctactaaacaa 240
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 381 tccaaataaggagacacatttgtaaaaacaatgcaataaaattggattcctactaaacaa 440
Query: 241 tttacaaattattaatttaattaaaacacatggaagtcatgtagcataattataatttgc 300
|||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 441 tttacaaaataaaaatttaattaaaacacatggaagccatgtagcaaaattataatttgc 500
Query: 301 tttaattgtaagtaacagaatcacactgcattttcagtttagataattgctttcaaggta 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 tttaattgtaagtaacagaatcacactgcattt-cagtttagataattgctttcaaggta 559
Query: 361 acattcttgaagcgtgtttattaaacaagaaaacaccaacttgtattgcccggaacacat 420
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 560 acattcttgaagcatgtttattaaacaagaaaacaccaacttgtattgtccggaacacat 619
Query: 421 cccagcagaggctgtttctgttgaggattgatggatagtgctggaaggaactgctagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cccagcagaggctgtttctgttgaggattgatggatagtgctggaaggaactgctagaat 679
Query: 481 gtgagtaaaactgtgggggtcta 503
|||||||||||||||||||||||
Sbjct: 680 gtgagtaaaactgtgggggtcta 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_o15.g1 MSMg01no445_o15.g1 CHROMAT_FILE:
MSMg01no445_o15.g1 PHD_FILE: MSMg01no445_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:17 2005
(474 letters)
>mm_chr5_48572069_48572942
Length = 874
Score = 880 bits (455), Expect = 0.0
Identities = 467/471 (99%)
Strand = Plus / Minus
Query: 1 attaaaagtgttaaataaaaatttgatgctaattttagccaccaaataataacaaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 attaaaagtgttaaataaaaatttgatgctaattttagccaccaaataataacaaaaatc 612
Query: 61 aactataagtatttcattgcaacagcatatagaatatgcatataattttacctgtcattt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 611 aactataagtatttcattgcaacagcatatagaatatgcatatacttttacctgtcattt 552
Query: 121 tagtacattaaataatctaaaattcatacaaatatttcttcatcagtgttttaaacactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tagtacattaaataatctaaaattcatacaaatatttcttcatcagtgttttaaacactg 492
Query: 181 aacacaaattcagtggaagaaggaataaaactgatgtttcaaagttggctgttgtcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aacacaaattcagtggaagaaggaataaaactgatgtttcaaagttggctgttgtcattt 432
Query: 241 ttccctgatgtttgtgcttgaaattaaaaatcttattgttcatgttaaaattttactttt 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 431 ttccctgatgtttgtgcttgaaattaaaaatctaattgttcatgttaaaattttactttt 372
Query: 301 tatccagggaagaatgaatggaggtaggagaaactttggtagtcatgtattgtatgagag 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 371 tatccagggaagaatgaatggagggaggagaaactttggtagtcatgtattgtatgagag 312
Query: 361 aataattttaaaaaagaattctctcttgaaataaatactatctacaatcaactcctattt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gataattttaaaaaagaattctctcttgaaataaatactatctacaatcaactcctattt 252
Query: 421 ccaataagcagtttggacactggtatcttgaggcttatagacattattttt 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccaataagcagtttggacactggtatcttgaggcttatagacattattttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
