NNNGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAT
CCGCGGAATTCAGTGTCAAATTTCTTAGACTTTTAATCTGGGCAAACTCA
CAGGATTGGTTTATAATATTGCCCTTGAAATATCTCGATTTACTAATGGG
AGAAAAAGATTTCTATAAAAGAATAATACAACTGTTTGTGAAGTTTTAAA
TGTAGTTTATGTGCTTTAAGAAGAAAATTAACTGGCCTATTTTTAAAATA
AGTAGCACTCTTTTTATAAAATTAAATAAAGTCCTAAGACCAATCAGTGT
ATATCATTTAAGTGTGAAAGAAGTTAGCTTTTGTTTTTTTGTTGACCTTC
AGCATTCTTCAATGTAAAATCTCCACTTAGGTCTTGGTAGTCATAGTAAT
ACGGACATCTCTTGGAGGTATTTGTGAGCCCTACTTCACGTGACTGATGT
GTGATTTCAGCAAAGGCAACCTAACAGGGAATTGATTCTACATTGTAACG
TCTACTTCATCAGCGTCCTTCAGCAGCCAACTCAGAATGTCATTCTGGGA
TGTGAAGCAGCTGCACTGAAAACACTTGTTCCGAGACATTTTTCAATAAA
TGAATCGATGTGTTCATTTTAAGTCTGGAGCAAGCTCATTAGAGCATGGT
GAACGAATCACACACTGTTAGTTACTTGTTTTATTTTGGCAACGAAATTT
TAAATAACAACTGTTCAGGGTAAAACAATTAAAACATTGTTCATATTTTA
TGGTGGGN

NNNNCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACTTGAGGAATCCTGAAT
GGCTGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGAGAAA
TGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGTT
AAGATAAAAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAG
AGGAACACTCCTCTATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCT
GGAAATCAGTCTGGCGGTTCCTCAGAAAATTTGATANTTTACTACTTGAG
GATCCCGCAATATATCTCCTGGACATATATTCAGAAAATGTTCCAACTGG
TAAGAAGGACACATGCTCCATTGTGTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATATGGTACATTTACACAATGGAGTACTACTCAGCTATTTAAAAAAT
GAATTTATGAAATTCCTAGGGCAATGGATGGACCTGGAGGGCATCATCCT
GAGGGAGGGAACCCAATCACAAAATAACTCACATGATATGGACTCCCTGA
AATGTGGATATTAGCCCCCAAACTTATTTTTTTTTTGGGAAAGGGAGCAC
CTTGGCGAAACTTTGGAAACTCCGGGGGAACAAAATAGTTTGTGGTGGAA
ATCCTTTCCCCTTT

Query= MSMg01no449_j21.b1 MSMg01no449_j21.b1 CHROMAT_FILE:
MSMg01no449_j21.b1 PHD_FILE: MSMg01no449_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:17 2005
         (481 letters)



>mm_chr5_97840169_97841049
          Length = 881

 Score =  853 bits (441), Expect = 0.0
 Identities = 471/481 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttttaatctgggcaaactcacaggattggtttataatattgcccttgaaatatctcgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttttaatctgggcaaactcacaggattggtttataatattgcccttgaaatatctcgat 622

                                                                       
Query: 61  ttactaatgggagaaaaagatttctataaaagaataatacaactgtttgtgaagttttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttactaatgggagaaaaagatttctataaaagaataatacaactgtttgtgaagttttaa 562

                                                                       
Query: 121 atgtagtttatgtgctttaagaagaaaattaactggcctatttttaaaataagtagcact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtagtttatgtgctttaagaagaaaattaactggcctatttttaaaataagtagcact 502

                                                                       
Query: 181 ctttttataaaattaaataaagtcctaagaccaatcagtgtatatcatttaagtgtgaaa 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttttaaaaaattaaataaagtcctaagaccaatcagtgtatatcatttaagtgtgaaa 442

                                                                       
Query: 241 gaagttagcttttgtttttttgttgaccttcagcattcttcaatgtaaaatctccactta 300
           |||||||||||||||  |  | |||||||||||| |||||||||||||||||||||||||
Sbjct: 441 gaagttagcttttgtcataatattgaccttcagcgttcttcaatgtaaaatctccactta 382

                                                                       
Query: 301 ggtcttggtagtcatagtaatacggacatctcttggaggtatttgtgagccctacttcac 360
           |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 ggtcttggtagtcataataatacggacatctcttggaggtatttgtgagccttacttcac 322

                                                                       
Query: 361 gtgactgatgtgtgatttcagcaaaggcaacctaacagggaattgattctacattgtaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgactgatgtgtgatttcagcaaaggcaacctaacagggaattgattctacattgtaac 262

                                                                       
Query: 421 gtctacttcatcagcgtccttcagcagccaactcagaatgtcattctgggatgtgaagca 480
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 gtctacttcatcagcgtccttcagcagccaactcagaatggcattctgggatgtgaagca 202

            
Query: 481 g 481
           |
Sbjct: 201 g 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)