MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-450D20
Chromosome	5 (Build37)
Map Location	144,685,813 - 144,686,058
singlet/doublet	singlet
Overlap gene	Pms2
Upstream gene	Fscn1, 2810055G22Rik, LOC667809, Olfr718-ps1, LOC640324, LOC100042605, Rbak, 4933411G11Rik, Spdyb, Zfp12, Zfp316, Gm792, E130309D02Rik, Zdhhc4, Grid2ip, Kdelr2, LOC231869, LOC670671, Daglb, Rac1, 2810453I06Rik, Pscd3, Usp42, Eif2ak1, 4921520G13Rik, Jtv1
Downstream gene	4930526H21Rik, AU022870, Ocm, Lmtk2, Bhlhb8, 2210010N04Rik, Bri3, Baiap2l1, 4930568B11Rik, Nptx2, EG621967, Tmem130, LOC100039427, Trrap, Smurf1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Fscn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14086 MGI:1352745
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810055G22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108086 MGI:1344349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667809 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667809
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Olfr718-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258006 MGI:3030552
definition	gene_synonym : MOR0-10P note : olfactory receptor 718, pseudogene 1 pseudo : _no_value

name	LOC640324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 47 Proteins pseudo : _no_value

name	LOC100042605 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 58 ESTs

name	Rbak (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57782 MGI:1927369
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4933411G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330228 MGI:3612701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spdyb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74673 MGI:1921923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231866 MGI:99157
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp316 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54201 MGI:1860402
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm792 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330230 MGI:2685638
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins

name	E130309D02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231868 MGI:2442621
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72881 MGI:1920131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grid2ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170935 MGI:2176213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kdelr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66913 MGI:1914163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC231869 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:231869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 141 ESTs, 28 Proteins pseudo : _no_value

name	LOC670671 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670671
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Daglb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231871 MGI:2442032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rac1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19353 MGI:97845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810453I06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67238 MGI:1914488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pscd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19159 MGI:1335107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp42 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76800 MGI:1924050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif2ak1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15467 MGI:1353448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921520G13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66729 MGI:1913979
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Jtv1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231872 MGI:2385237
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pms2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18861 MGI:104288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930526H21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75136 MGI:1922386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins

name	AU022870 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231874 MGI:2141070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ocm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18261 MGI:97401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lmtk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231876 MGI:3036247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bhlhb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17341 MGI:891976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210010N04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70381 MGI:1917631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bri3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55950 MGI:1933174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Baiap2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66898 MGI:1914148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930568B11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75873 MGI:1923123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Nptx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53324 MGI:1858209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621967 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621967 MGI:3643871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Tmem130 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243339 MGI:3607706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039427 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Trrap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100683 MGI:2153272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smurf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75788 MGI:1923038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fscn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680347 GeneID:14086 MGI:1352745
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus) transcript_id : NM_007984.2

name	2810055G22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46391096 GeneID:108086 MGI:1344349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810055G22 gene transcript_id : NM_080561.3

name	LOC100042605 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254682 GeneID:100042605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 ESTs product : hypothetical protein LOC100042605, transcript variant 1 transcript_id : XM_001478588.1

name	LOC100042605 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254684 GeneID:100042605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs product : hypothetical protein LOC100042605, transcript variant 2 transcript_id : XM_001478596.1

name	Rbak (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865970 GeneID:57782 MGI:1927369
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RB-associated KRAB repressor transcript_id : NM_001045482.1

name	Rbak (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865969 GeneID:57782 MGI:1927369
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RB-associated KRAB repressor transcript_id : NM_021326.2

name	4933411G11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368861 GeneID:330228 MGI:3612701
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933411G11Rik gene transcript_id : NM_177880.3

name	Spdyb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676390 GeneID:74673 MGI:1921923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : speedy homolog B (Drosophila) transcript_id : NM_029048.3

name	Zfp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113866020 GeneID:231866 MGI:99157
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 12 transcript_id : NM_177681.3

name	Zfp316 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:49227201 GeneID:54201 MGI:1860402
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 316 transcript_id : NM_017467.2

name	Gm792 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254677 GeneID:330230 MGI:2685638
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins product : gene model 792, (NCBI) transcript_id : XM_001472438.1

name	E130309D02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354463 GeneID:231868 MGI:2442621
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130309D02 gene transcript_id : NM_172726.3

name	Zdhhc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802824 GeneID:72881 MGI:1920131
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 4 transcript_id : NM_028379.2

name	Grid2ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19111165 GeneID:170935 MGI:2176213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1 transcript_id : NM_133355.1

name	Kdelr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372790 GeneID:66913 MGI:1914163
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 transcript_id : NM_025841.2

name	Daglb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032008 GeneID:231871 MGI:2442032
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol lipase, beta transcript_id : NM_144915.3

name	Rac1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676397 GeneID:19353 MGI:97845
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS-related C3 botulinum substrate 1 transcript_id : NM_009007.2

name	2810453I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802312 GeneID:67238 MGI:1914488
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810453I06 gene transcript_id : NM_133703.3

name	2810453I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21313057 GeneID:67238 MGI:1914488
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810453I06 gene transcript_id : NM_026050.1

name	Pscd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802529 GeneID:19159 MGI:1335107
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology, Sec7 and coiled-coil domains 3 transcript_id : NM_011182.3

name	Usp42 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116686115 GeneID:76800 MGI:1924050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 42 transcript_id : NM_029749.2

name	Eif2ak1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248524 GeneID:15467 MGI:1353448
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 2 alpha kinase 1 transcript_id : NM_013557.2

name	4921520G13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349436 GeneID:66729 MGI:1913979
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921520G13 gene transcript_id : NM_025732.2

name	Jtv1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122694 GeneID:231872 MGI:2385237
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : JTV1 gene transcript_id : NM_146165.1

name	Pms2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583909 GeneID:18861 MGI:104288
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : postmeiotic segregation increased 2 (S. cerevisiae) transcript_id : NM_008886.2

name	4930526H21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375815 GeneID:75136 MGI:1922386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins product : RIKEN cDNA 4930526H21 gene, transcript variant 1 transcript_id : XM_205565.5

name	AU022870 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32129297 GeneID:231874 MGI:2141070
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU022870 transcript_id : NM_177682.3

name	Ocm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31742493 GeneID:18261 MGI:97401
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oncomodulin transcript_id : NM_033039.1

name	Lmtk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487400 GeneID:231876 MGI:3036247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lemur tyrosine kinase 2 transcript_id : NM_001081109.1

name	Bhlhb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50363366 GeneID:17341 MGI:891976
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic helix-loop-helix domain containing, class B, 8 transcript_id : NM_010800.3

name	2210010N04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249057 GeneID:70381 MGI:1917631
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210010N04 gene transcript_id : NM_027410.1

name	Bri3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370800 GeneID:55950 MGI:1933174
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain protein I3 transcript_id : NM_018772.3

name	Baiap2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92110034 GeneID:66898 MGI:1914148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BAI1-associated protein 2-like 1 transcript_id : NM_025833.3

name	4930568B11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254735 GeneID:75873 MGI:1923123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930568B11 gene transcript_id : XM_001472771.1

name	Nptx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560467 GeneID:53324 MGI:1858209
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuronal pentraxin 2 transcript_id : NM_016789.2

name	EG621967 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82899793 GeneID:621967 MGI:3643871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG621967 transcript_id : XM_886369.1

name	Tmem130 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130473 GeneID:243339 MGI:3607706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 130 transcript_id : NM_177735.4

name	LOC100039427 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254737 GeneID:100039427
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100039427 transcript_id : XM_001472864.1

name	Trrap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486948 GeneID:100683 MGI:2153272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformation/transcription domain-associated protein transcript_id : NM_001081362.1

name	Smurf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87044885 GeneID:75788 MGI:1923038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SMAD specific E3 ubiquitin protein ligase 1 transcript_id : NM_029438.3

name	Smurf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87044889 GeneID:75788 MGI:1923038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SMAD specific E3 ubiquitin protein ligase 1 transcript_id : NM_001038627.1

name	Fscn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680348 CCDS:CCDS19834.1 GeneID:14086 MGI:1352745
definition	GO_component : GO:0030175 - filopodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0051015 - actin filament binding [Evidence IEA]; GO:0030674 - protein binding, bridging [Evidence IEA] codon_start : 1 note : fascin 1 product : fascin homolog 1, actin bundling protein protein_id : NP_032010.2

name	2810055G22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46358407 GeneID:108086 MGI:1344349
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : E3 ubiquitin ligase product : ubiquitin conjugating enzyme 7 interacting protein 1 protein_id : NP_542128.2

name	LOC100042605 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254683 GeneID:100042605
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001478638.1

name	LOC100042605 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254685 GeneID:100042605
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001478646.1

name	Rbak (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865971 GeneID:57782 MGI:1927369
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : RB-associated KRAB repressor protein_id : NP_001038947.1

name	Rbak (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789126 CCDS:CCDS19835.1 GeneID:57782 MGI:1927369
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : RB-associated KRAB repressor protein_id : NP_067301.1

name	4933411G11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244494 GeneID:330228 MGI:3612701
definition	codon_start : 1 product : hypothetical protein LOC330228 protein_id : NP_808548.1

name	Spdyb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117676391 GeneID:74673 MGI:1921923
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0019901 - protein kinase binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045737 - positive regulation of cyclin-dependent protein kinase activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IMP] codon_start : 1 note : ringo B; speedy/ringo; speedy homolog 2 product : speedy B protein_id : NP_083324.3

name	Zfp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244112 CCDS:CCDS19837.1 GeneID:231866 MGI:99157
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : zinc finger protein 12 protein_id : NP_808349.1

name	Zfp316 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49227202 CCDS:CCDS19838.1 GeneID:54201 MGI:1860402
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : kruppel-related zinc finger protein; transcription factor MZF-3 product : zinc finger protein 316 protein_id : NP_059495.2

name	Gm792 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254678 GeneID:330230 MGI:2685638
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472488.1

name	E130309D02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982102 CCDS:CCDS19839.1 GeneID:231868 MGI:2442621
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC231868 protein_id : NP_766314.2

name	Zdhhc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312169 CCDS:CCDS19840.1 GeneID:72881 MGI:1920131
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, DHHC domain containing 4 protein_id : NP_082655.1

name	Grid2ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19111166 CCDS:CCDS19841.1 GeneID:170935 MGI:2176213
definition	GO_component : GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence TAS]; GO:0016043 - cell organization and biogenesis [Evidence IEA]; GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence TAS] codon_start : 1 note : GluR-delta2 philic-protein; delphilin; L-delphilin product : glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1 protein_id : NP_579933.1

name	Kdelr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385318 GeneID:66913 MGI:1914163
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046923 - ER retention sequence binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006621 - protein retention in ER [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 protein_id : NP_080117.1

name	Daglb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559956 GeneID:231871 MGI:2442032
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : diacylglycerol lipase, beta protein_id : NP_659164.2

name	Rac1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45592934 CCDS:CCDS19843.1 GeneID:19353 MGI:97845
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0019897 - extrinsic to plasma membrane [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IDA]; GO:0003924 - GTPase activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IDA]; GO:0016477 - cell migration [Evidence IDA]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IDA]; GO:0016358 - dendrite development [Evidence IDA]; GO:0006897 - endocytosis [Evidence IDA]; GO:0006972 - hyperosmotic response [Evidence IDA]; GO:0030032 - lamellipodium biogenesis [Evidence TAS] [Evidence IDA]; GO:0030838 - positive regulation of actin filament polymerization [Evidence IDA]; GO:0043552 - positive regulation of phosphoinositide 3-kinase activity [Evidence IMP]; GO:0007264 - small GTPase mediated signal transduction [Evidence IDA] codon_start : 1 product : RAS-related C3 botulinum substrate 1 protein_id : NP_033033.1

name	2810453I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313058 GeneID:67238 MGI:1914488
definition	codon_start : 1 exception : mismatches in translation note : STAT3-interacting protein as a repressor product : hypothetical protein LOC67238 protein_id : NP_080326.1

name	2810453I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29135344 GeneID:67238 MGI:1914488
definition	codon_start : 1 exception : mismatches in translation note : STAT3-interacting protein as a repressor product : hypothetical protein LOC67238 protein_id : NP_598464.2

name	Pscd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981544 CCDS:CCDS19845.1 GeneID:19159 MGI:1335107
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0001726 - ruffle [Evidence IPI] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence ISS]; GO:0005547 - phosphatidylinositol-3,4,5-triphosphate binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045785 - positive regulation of cell adhesion [Evidence IDA]; GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytohesin 3 product : pleckstrin homology, Sec7 and coiled-coil domains 3 protein_id : NP_035312.2

name	Usp42 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116686116 GeneID:76800 MGI:1924050
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 42 protein_id : NP_084025.2

name	Eif2ak1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248525 GeneID:15467 MGI:1353448
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004694 - eukaryotic translation initiation factor 2alpha kinase activity [Evidence ISS]; GO:0020037 - heme binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IMP] [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence IDA]; GO:0046986 - negative regulation of hemoglobin biosynthesis [Evidence IDA]; GO:0017148 - negative regulation of protein biosynthesis [Evidence IEA]; GO:0045993 - negative regulation of translational initiation by iron [Evidence ISS]; GO:0046777 - protein amino acid autophosphorylation [Evidence IEP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IMP]; GO:0009605 - response to external stimulus [Evidence ISS]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 exception : unclassified translation discrepancy note : heme-regulated inhibitor product : eukaryotic translation initiation factor 2 alpha kinase 1 protein_id : NP_038585.2

name	4921520G13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385192 GeneID:66729 MGI:1913979
definition	codon_start : 1 product : hypothetical protein LOC66729 protein_id : NP_080008.1

name	Jtv1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122695 GeneID:231872 MGI:2385237
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : JTV1 protein_id : NP_666277.1

name	Pms2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583910 GeneID:18861 MGI:104288
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS] GO_process : GO:0006281 - DNA repair [Evidence IMP]; GO:0007126 - meiosis [Evidence TAS]; GO:0006298 - mismatch repair [Evidence ISS] [Evidence TAS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 note : mismatch repair; DNA mismatch repair product : postmeiotic segregation increased 2 protein_id : NP_032912.2

name	4930526H21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82899845 GeneID:75136 MGI:1922386
definition	codon_start : 1 product : hypothetical protein LOC75136 isoform 1 protein_id : XP_205565.4

name	AU022870 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244114 CCDS:CCDS19846.1 GeneID:231874 MGI:2141070
definition	codon_start : 1 product : hypothetical protein LOC231874 protein_id : NP_808350.1

name	Ocm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31742494 GeneID:18261 MGI:97401
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : oncomodulin protein_id : NP_149028.1

name	Lmtk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487401 GeneID:231876 MGI:3036247
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence ISS]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence ISS]; GO:0048011 - nerve growth factor receptor signaling pathway [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0046777 - protein amino acid autophosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : lemur tyrosine kinase 2 protein_id : NP_001074578.1

name	Bhlhb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754700 CCDS:CCDS19847.1 GeneID:17341 MGI:891976
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA] [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IDA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IMP]; GO:0048469 - cell maturation [Evidence IMP]; GO:0007267 - cell-cell signaling [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0042593 - glucose homeostasis [Evidence IMP]; GO:0007030 - Golgi organization and biogenesis [Evidence IMP]; GO:0048312 - intracellular distribution of mitochondria [Evidence IMP]; GO:0006851 - mitochondrial calcium ion transport [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : muscle, intestine and stomach expression 1 protein_id : NP_034930.1

name	2210010N04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249058 GeneID:70381 MGI:1917631
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC70381 protein_id : NP_081686.1

name	Bri3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098094 CCDS:CCDS19848.1 GeneID:55950 MGI:1933174
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : brain protein I3 protein_id : NP_061242.2

name	Baiap2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313234 GeneID:66898 MGI:1914148
definition	codon_start : 1 product : BAI1-associated protein 2-like 1 protein_id : NP_080109.1

name	4930568B11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254736 GeneID:75873 MGI:1923123
definition	codon_start : 1 product : hypothetical protein LOC75873 protein_id : XP_001472821.1

name	Nptx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949098 CCDS:CCDS19849.1 GeneID:53324 MGI:1858209
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] codon_start : 1 note : neuro activity regulated petaxin product : neuronal pentraxin 2 protein_id : NP_058069.1

name	EG621967 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82899794 GeneID:621967 MGI:3643871
definition	codon_start : 1 product : similar to ribosomal protein S29 protein_id : XP_891462.1

name	Tmem130 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46048368 CCDS:CCDS19851.1 GeneID:243339 MGI:3607706
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC243339 protein_id : NP_808403.2

name	LOC100039427 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254738 GeneID:100039427
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472914.1

name	Trrap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486949 GeneID:100683 MGI:2153272
definition	GO_component : GO:0000123 - histone acetyltransferase complex [Evidence TAS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA]; GO:0007093 - mitotic checkpoint [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transactivation/transformation-domain associated protein product : transformation/transcription domain-associated protein protein_id : NP_001074831.1

name	Smurf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87044886 GeneID:75788 MGI:1923038
definition	GO_component : GO:0005622 - intracellular [Evidence ISS] [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence ISS]; GO:0007398 - ectoderm development [Evidence ISS]; GO:0030514 - negative regulation of BMP signaling pathway [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0042787 - protein ubiquitination during ubiquitin-dependent protein catabolism [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence ISS] [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Smad ubiquitination regulatory factor 1 product : Smad ubiquitination regulatory factor 1 isoform 2 protein_id : NP_083714.3

name	Smurf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87044890 GeneID:75788 MGI:1923038
definition	GO_component : GO:0005622 - intracellular [Evidence ISS] [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence ISS]; GO:0007398 - ectoderm development [Evidence ISS]; GO:0030514 - negative regulation of BMP signaling pathway [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0042787 - protein ubiquitination during ubiquitin-dependent protein catabolism [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence ISS] [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Smad ubiquitination regulatory factor 1 product : Smad ubiquitination regulatory factor 1 isoform 1 protein_id : NP_001033716.1

name	LOC640324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:640324
definition	number : 2 pseudo : _no_value

name	LOC640324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:640324
definition	number : 1 pseudo : _no_value

name	LOC670671 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670671
definition	number : 1 pseudo : _no_value

name	LOC667809 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254681 GeneID:667809
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to rat ribosomal protein L9 homologue pseudo : _no_value transcript_id : XR_033764.1

name	LOC231869 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254686 GeneID:231869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 141 ESTs, 28 Proteins product : similar to cyclin B1 pseudo : _no_value transcript_id : XR_033857.1

clone name	MSMg01-528G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207O06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-072D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201M05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-084N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-201O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-198H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-450D20.T7 (MSMg01no450_d20.b1)	MSMg01-450D20.TJ (MSMg01no450_d20.g1)
ACC	AG538017	AG538018
length	944	780
length of high quality (start - end)	---	246 (72 - 317)
definition	CHROMAT_FILE: MSMg01no450_d20.b1 PHD_FILE: MSMg01no450_d20.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:20:05 2005	CHROMAT_FILE: MSMg01no450_d20.g1 PHD_FILE: MSMg01no450_d20.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:20:05 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTATXXXXXXXXXXXXXXXXXXXXXXXXTAGCGAAGAGCGATCCGCGGAA TTCACTGGCTTTCAGGATTGAAGCCAGAGGAGCCGCCATGGATAGGTGGA ACAGGGGAAGAGATTGAACAAGGATCATGCACAGAGAGAAGGGGACGAGG AGAGGATGAAGAGGTGGTATGCGCTCCCTTTCCTTCTTCCTCCTCTCTTT TCTTCCCTTCCTTCCTTCTTTCTCTTCTCTTCTCCCCCCTCTCCTCTTTC TTCTTCTCTTTTTCTCTTTTTTCCCCTTCCCCTTCTCCTTTTTTCCCCTT CCCCCCCTTGTTTTTCTTCCCCTTCTTCCGTCCTTTTTTTTTTTCTCTCT CCCCCCCCCCTTTTCCCCCCCTTTTTCTTCCCTTTCTTCCTTTTCCCTCT TTCTTTCTTCCTCTTTCTTTCTTCTTCTCTTTTTTTTCTTTCTCCTTTCT TGCTCCCCCCCCCTTTCTTTTTTTTCTTCTTCCCCCTTTCCTTCCCCTCT TTCTCCTTTTTTCCCCTCTCCCCTCCTCCTTTTTTTCTCCTCCCTCCTTT CTTCCTTCTGTCCTTCTCCCCCTTCTTCTTCCCCTTCTTTCCCTCTTCTC TTTTCCCCCCTTTTCTTTTCCTCTTTCTCTCCCCTTTTCTCCTCCTTCCC CTCTTTTTCTCTCTTTCCTCTCTTTTCTCTCCCCCCCTCTTTCCTTTTTT CCTCTTTTTTCTTCTCCCCTCCCCTCTTTTTTTTTTCCTCTTTCCCTCTT CTTTCCTTCCCCTCCTCCCCTCTCCTCTTTTTCTTTTCTCCCTTCCTTTC TCCTTCCCTCCCTCCTCCTCCTCCTCTTCCTCCTTTTCCCTTTCTTTCTT TTTCCCCTCTCCCTTCCGTTTTCCCTTTCTCCTCTTCCCTCCTTTCTCCC TCTTTGTTTCTCTCTTTCTCTCCTTTTTCCTCCCTTTCCCTCTC	AATGAAGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXTCTGCCTCCTTATCTGAGCCTTCTCAGTG CAGGGATCATAGGGTGTGGCATCTGCTCAGCATGGGTGGGCATCTTTGAT GGAGCAGCAGAGCTGGGTCACAGATGTGCATACATCAAGACTTCATTTAT ATCCCCTTTAGGATGGGTTCTGGCCAGTGTTGCTGTATTTTATTTGCAGT TTGCCCTTTGCTTTGTGGACTGCCTGTTCACGTGAAGATAACCCTCCTGT TCCTGCTCAGCACACTCTTTTATTCTTTTTTCTGTTCCTCTCTGCTAGGT AACTTATTAAAGCTGCATACTGCAGAACTAGAAAAGCCTGTGCCAGGAAA GCAAGATAACTCTCCTTCACTGAAGAGCACAGCATATGAGAAAAGGGTAG CATCCATCTCCAGGCTGAGAGAGGCCTTTTCTCTTCATCCTACTAAAGAG ATCAAGTCTAGGGGCCCAGAGACTGCTGAACTGACCCGTAGTTTTCCTAG GGAGAATAGGGGTGTGTTATCCTCTTATCCCTCAGACTTCATCTCTTACA GAGGTCTCCATGTTCTCGTATCTATATTTGGTGTAGCTCCATGTACCATT CTCGGTGATTTGTTTTTTTTCTATACCATACTCACTTTCTCTTATCTTTT TTTGTATTTCTTTTCCTTTTCCTTTCTCCTGCATCTTTGTTTTTTGTTTT CTTTTCCAATTTGTTCTTATTACTTCTCTC
quality values	Open. Hide. 8 8 8 9 16 18 20 15 12 11 11 11 15 21 13 8 8 8 12 22 37 44 29 28 15 8 6 7 6 6 6 6 8 6 6 7 8 8 8 8 8 8 17 18 20 27 31 37 32 32 30 32 28 30 17 21 8 6 6 6 7 7 9 9 7 9 16 17 22 15 12 12 18 21 24 31 31 30 47 30 19 9 9 9 9 14 29 23 16 16 18 13 13 10 19 19 16 13 10 9 9 9 9 9 10 12 12 12 12 15 20 12 10 10 10 13 11 11 12 12 11 11 12 12 12 12 12 12 22 11 11 11 12 12 21 21 20 17 17 18 18 12 12 11 11 11 11 16 16 17 17 19 19 16 16 12 12 12 12 12 11 12 12 14 9 9 10 10 10 11 12 10 12 10 11 11 14 13 11 10 9 6 10 8 10 10 12 17 10 16 10 13 8 8 8 10 8 8 10 13 10 8 8 8 8 12 9 9 8 8 8 8 14 10 13 8 8 6 6 8 8 10 10 10 8 12 10 10 9 8 8 7 7 10 10 12 15 10 10 9 9 10 17 22 28 8 8 8 8 8 8 8 10 8 8 8 8 10 12 20 20 23 24 12 11 13 15 15 16 19 11 15 12 8 10 8 8 8 8 8 8 12 13 14 18 18 14 16 14 14 14 13 22 12 11 8 10 8 8 8 11 8 9 10 18 19 23 23 10 8 8 12 8 9 13 18 21 19 23 16 17 12 12 14 19 20 15 15 6 6 6 11 8 17 18 8 9 9 9 9 7 9 9 9 10 11 18 15 13 10 9 8 9 9 12 15 14 12 12 15 19 18 11 9 10 10 8 9 10 9 9 9 12 9 19 22 19 14 23 18 11 9 10 9 9 10 11 12 11 11 11 12 21 16 12 9 9 9 11 11 17 10 11 11 11 11 15 19 15 11 11 19 23 36 26 22 10 10 8 8 8 10 8 6 6 6 11 10 10 10 15 15 18 18 19 14 8 8 8 8 8 8 8 22 19 24 22 15 15 8 7 7 8 11 13 20 18 22 14 10 9 9 9 15 11 8 9 9 14 11 16 15 15 13 10 10 10 10 19 13 13 10 10 10 19 13 13 10 11 11 15 16 22 20 8 8 8 15 15 15 17 10 10 8 8 8 8 8 8 8 11 14 14 19 20 11 10 19 19 9 10 10 10 9 11 14 12 12 10 10 10 8 11 12 13 10 8 8 10 10 23 10 10 10 9 9 16 16 18 13 18 19 10 8 8 8 8 15 9 9 9 9 9 9 9 13 17 14 14 12 23 23 28 22 19 12 12 9 9 11 8 8 9 9 10 6 6 8 15 8 8 8 9 13 8 8 16 11 9 10 11 12 16 13 11 11 11 12 22 11 14 14 20 20 19 15 13 10 9 10 10 13 15 18 16 12 10 8 8 7 7 7 9 15 9 6 8 9 11 13 11 11 10 10 15 9 9 8 8 8 7 7 9 13 22 16 19 15 8 8 8 8 8 12 12 21 21 20 10 13 7 7 8 10 16 8 10 7 9 10 11 27 17 11 10 8 8 8 8 10 8 8 8 7 7 8 8 10 18 11 24 24 27 27 24 13 9 8 8 8 6 6 8 8 9 8 8 9 9 12 9 10 10 11 15 19 25 22 32 37 41 34 34 13 13 9 9 9 19 17 11 11 11 17 11 10 10 10 10 10 12 12 10 13 15 11 15 12 21 21 15 15 9 9 18 9 11 8 8 11 8 9 9 10 8 8 8 12 13 15 13 8 8 8 8 10 12 9 9 9 9 9 9 8 8 10 11 9 13 8 9 8 8 8 10 10 11 11 11 9 8 8 6 6 10 10 13 13 18 18 13 19 10 7 7 9 17 19 16 15 10 10 10 12 7 9 9 9 9 9 12 8 10 9 8 10 10 19 14 24 19 18 19 16 16 19 23 13 9 9 12 12 22 30 17 17 8 9 8 17 19 14 9 9 9 9 9 14 12 10 9 10 10 12 12 14 15 20 15 24 22 15 13 9 9 10 21 13 15 7 15 7 7 11 6 6 6 7 10 9 9 12 22 22 14 14 12 17 11 12 12 18 23 21 20 21 19 37 31 30 34 22 14 23 12 12 14 9 14 10 9 8 8 8	Open. Hide. 8 8 8 8 10 9 14 13 9 9 9 9 10 18 24 34 25 25 3 0 3 21 15 28 34 34 23 21 9 9 9 9 9 9 6 7 6 6 6 6 8 8 10 15 23 24 12 11 11 26 28 42 41 27 27 8 6 6 6 7 6 7 7 7 9 9 11 12 11 11 11 19 18 26 28 41 59 48 48 48 57 48 50 50 50 48 48 53 57 59 27 27 9 10 9 21 21 26 27 16 24 24 29 26 27 24 27 29 33 33 33 41 37 37 28 32 32 24 24 14 14 14 25 32 40 47 47 47 48 48 48 57 48 54 54 57 48 48 48 48 48 48 48 54 54 57 48 46 39 39 41 46 48 44 36 18 18 12 12 12 12 32 34 47 42 37 30 35 28 35 31 42 37 41 41 43 57 57 48 48 42 47 42 54 54 57 54 50 50 50 50 44 57 50 54 54 57 59 57 57 57 57 57 57 59 59 57 57 57 48 41 42 42 42 41 47 48 57 59 59 57 57 57 57 44 44 32 41 20 20 20 41 34 57 43 43 43 47 47 48 48 48 48 48 42 27 24 12 12 12 27 18 11 11 16 27 43 48 48 48 59 57 43 43 36 36 36 47 47 59 59 59 48 48 59 48 57 57 39 31 24 22 22 25 29 37 40 37 39 37 32 28 31 39 39 39 39 41 46 47 39 37 39 39 47 39 44 43 41 41 41 34 34 18 19 9 9 6 8 8 6 7 7 12 12 11 25 28 59 47 47 37 32 30 28 28 37 41 48 43 43 37 37 37 37 37 28 28 15 14 14 28 23 34 28 18 15 15 10 11 11 15 18 18 19 12 12 12 18 21 28 22 24 15 12 12 18 25 28 30 28 32 28 30 30 33 40 40 43 46 48 43 43 36 39 39 42 25 21 12 12 11 12 19 15 28 28 32 32 20 28 20 20 20 24 23 18 13 13 13 18 21 18 13 10 10 10 13 12 14 23 16 11 12 10 6 6 8 8 10 12 15 15 28 28 23 23 23 23 23 23 24 21 20 23 23 28 37 31 33 30 29 29 36 29 19 28 12 13 12 18 10 22 10 12 12 26 32 42 39 40 39 40 31 24 22 16 16 24 32 32 32 28 28 22 22 23 28 20 21 11 11 11 15 15 28 26 26 16 15 19 14 14 14 26 24 22 21 11 11 11 15 25 15 10 10 10 12 9 18 18 23 19 19 12 11 11 11 8 8 8 8 8 8 8 15 8 6 8 6 7 6 6 8 10 8 8 8 11 10 14 13 13 11 10 11 16 11 11 11 11 11 11 14 20 27 23 15 10 10 11 11 11 15 15 13 16 11 11 11 12 11 11 11 22 10 10 8 8 8 8 15 10 12 12 19 19 17 11 6 8 6 6 8 8 10 15 10 10 10 8 8 6 6 8 8 8 10 10 8 8 13 16 11 11 10 10 16 22 16 13 10 10 10 8 8 6 6 8 19 15 8 8 8 8 8 10 10 10 15 10 10 10 19 19 24 28 22 17 8 8 8 8 8 8 10 11 11 11 18 18 14 10 10 10 8 8 6 6 8 8 8 8 8 10 15 10 10 12 18 13 12 10 12 14 12 12 8 8 8 8 8 12 10 11 11 12 15 16 17 10 10 10 8 8 8 8 10 8 8 9 9 9 10 11 8 10 7 9 10 11 9 10 11 8 8 8 13 10 10 10 8 10 8 8 8 9 9 8 8 13 15 10 8 8 10 13 10 10 10 8 8 8 10 15 8 7 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no450_d20.g1 MSMg01no450_d20.g1 CHROMAT_FILE:
MSMg01no450_d20.g1 PHD_FILE: MSMg01no450_d20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:05 2005
         (246 letters)



>mm_chr5_144685613_144686258
          Length = 646

 Score =  453 bits (234), Expect = e-132
 Identities = 243/246 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgcctccttatctgagccttctcagtgcagggatcatagggtgtggcatctgctcagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcctccttatctgagccttctcagtgcagggatcatagggtgtggcatctgctcagc 260

                                                                       
Query: 61  atgggtgggcatctttgatggagcagcagagctgggtcacagatgtgcatacatcaagac 120
           |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 261 atgggtgggcatctgtgatggagcagcagagctgggtcacagatgtgcatacgtcaaggc 320

                                                                       
Query: 121 ttcatttatatcccctttaggatgggttctggccagtgttgctgtattttatttgcagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatttatatcccctttaggatgggttctggccagtgttgctgtattttatttgcagtt 380

                                                                       
Query: 181 tgccctttgctttgtggactgcctgttcacgtgaagataaccctcctgttcctgctcagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccctttgctttgtggactgcctgttcacgtgaagataaccctcctgttcctgctcagc 440

                 
Query: 241 acactc 246
           ||||||
Sbjct: 441 acactc 446


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space:   150969
Effective search space used:   150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information