Query= MSMg01no450_i20.b1 MSMg01no450_i20.b1 CHROMAT_FILE:
MSMg01no450_i20.b1 PHD_FILE: MSMg01no450_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:31 2005
(140 letters)
>mm_chr5_39167462_39168001
Length = 540
Score = 201 bits (104), Expect = 1e-56
Identities = 128/136 (94%)
Strand = Plus / Plus
Query: 5 gaattccttgttttcagtctacactgtaagactgcagtgcctccatgttccagatcctct 64
|||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattccttgttgggagtctacactataagactgcagtgcctccatgttccagatccttt 264
Query: 65 aaatgtgctcccactggggcagagttttaatacataatttggagcatggtcctaaagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 aaatgtgctcccactggggcagagttttaatacataatttggagcatggtcttaaagatg 324
Query: 125 tacacccatgggctca 140
| |||| |||||||||
Sbjct: 325 tccacctatgggctca 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_i20.g1 MSMg01no450_i20.g1 CHROMAT_FILE:
MSMg01no450_i20.g1 PHD_FILE: MSMg01no450_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:31 2005
(339 letters)
>mm_chr5_39295375_39296112
Length = 738
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%), Gaps = 1/339 (0%)
Strand = Plus / Minus
Query: 1 tatgacatcagggaagctatgtgagaaaggacaaagatactttagccagagtctcagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tatgacatcagggaagctatgtgagaaaggacaaagatactttagccagagtctcagact 479
Query: 61 tggtttggttactaatacaaccttagcagagagaagagtttgtattccaggattttgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tggtttggttactaatacaaccttagcagagagaagagtttgtattccaggattttgcat 419
Query: 121 ctgtattaatctttaggtttccctctcttctaagagcctggagtcataattccaagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ctgtattaatctttaggtttccctctcttctaagagcctggagtcataattccaagtttg 359
Query: 181 aggtcatttgtgagactaatttacacccttaggttataaatattactaattttccatgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aggtcatttgtgagactaatttacacccttaggttataaatattactaattttccatgcc 299
Query: 241 ataccatgaccttatacctaagagagcatttttctaatagcagtgggcacctaatttcaa 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 298 ataccatgaccttatacctaagagagca-ttttctaatagcagtgggcacctaatttcaa 240
Query: 301 tgcattaaataatctcccctatctttcaattccagaatg 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgcattaaataatctcccctatctttcaattccagaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 738
Length adjustment: 9
Effective length of query: 330
Effective length of database: 729
Effective search space: 240570
Effective search space used: 240570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
