MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-450M10
Chromosome	5 (Build37)
Map Location	69,124,474 - 69,124,840
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Atp8a1, EG330097, EG666977, AY616753
Downstream gene	LOC666996, Kctd8, LOC545756, Yipf7, Guf1, Gnpda2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Atp8a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11980 MGI:1330848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG330097 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330097 MGI:3645064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	EG666977 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666977 MGI:3647963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 222 ESTs, 3 Proteins pseudo : _no_value

name	AY616753 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433899 MGI:3577767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666996 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 Proteins pseudo : _no_value

name	Kctd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243043 MGI:2443804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545756 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs, 12 Proteins pseudo : _no_value

name	Yipf7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75581 MGI:1922831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Guf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231279 MGI:2140726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnpda2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67980 MGI:1915230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp8a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84781801 GeneID:11980 MGI:1330848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 transcript_id : NM_001038999.1

name	Atp8a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84781809 GeneID:11980 MGI:1330848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 transcript_id : NM_009727.2

name	AY616753 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301144 GeneID:433899 MGI:3577767
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence, AY616753 transcript_id : NM_001018019.1

name	Kctd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301476 GeneID:243043 MGI:2443804
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel tetramerisation domain containing 8 transcript_id : NM_175519.4

name	Yipf7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130606 GeneID:75581 MGI:1922831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Yip1 domain family, member 7 transcript_id : NM_023784.4

name	Guf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064874 GeneID:231279 MGI:2140726
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GUF1 GTPase homolog (S. cerevisiae) transcript_id : NM_172711.2

name	Gnpda2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83999998 GeneID:67980 MGI:1915230
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosamine-6-phosphate deaminase 2 transcript_id : NM_001038015.1

name	Atp8a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781802 GeneID:11980 MGI:1330848
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; ATPase 8A1, p type; ATPase 8A1, aminophospholipid transporter (APLT), class I product : ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 isoform a protein_id : NP_001034088.1

name	Atp8a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106257 GeneID:11980 MGI:1330848
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; ATPase 8A1, p type; ATPase 8A1, aminophospholipid transporter (APLT), class I product : ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 isoform b protein_id : NP_033857.1

name	AY616753 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301145 CCDS:CCDS19319.1 GeneID:433899 MGI:3577767
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0045454 - cell redox homeostasis [Evidence IEA] codon_start : 1 product : glutaredoxin cysteine-rich 1 protein protein_id : NP_001018019.1

name	Kctd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301477 CCDS:CCDS19320.1 GeneID:243043 MGI:2443804
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA] codon_start : 1 product : potassium channel tetramerisation domain containing 8 protein_id : NP_780728.3

name	Yipf7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963821 CCDS:CCDS19321.1 GeneID:75581 MGI:1922831
definition	codon_start : 1 product : Yip1 domain family, member 7 protein_id : NP_076273.1

name	Guf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370038 CCDS:CCDS19322.1 GeneID:231279 MGI:2140726
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006413 - translational initiation [Evidence IEA] codon_start : 1 product : GUF1 GTPase homolog protein_id : NP_766299.1

name	Gnpda2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83999999 CCDS:CCDS19324.1 GeneID:67980 MGI:1915230
definition	EC_number : 5.3.1.10 GO_function : GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA] [Evidence ISS]; GO:0016853 - isomerase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006044 - N-acetylglucosamine metabolism [Evidence IEA] codon_start : 1 note : oscillin; glucosamine-6-phosphate isomerase product : glucosamine-6-phosphate deaminase 2 protein_id : NP_001033104.1

name	LOC666996 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666996
definition	number : 4 pseudo : _no_value

name	LOC666996 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666996
definition	number : 3 pseudo : _no_value

name	LOC666996 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666996
definition	number : 2 pseudo : _no_value

name	LOC666996 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666996
definition	number : 1 pseudo : _no_value

name	EG330097 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94374794 GeneID:330097 MGI:3645064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG330097 transcript_id : XR_002346.1

name	EG666977 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253948 GeneID:666977 MGI:3647963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 222 ESTs, 3 Proteins product : predicted gene, EG666977 pseudo : _no_value transcript_id : XR_033876.1

name	LOC545756 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253949 GeneID:545756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs, 12 Proteins product : similar to UMP-CMP kinase pseudo : _no_value transcript_id : XR_033911.1

clone name	MSMg01-163M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379A04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-383J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-450M10.T7 (MSMg01no450_m10.b1)	MSMg01-450M10.TJ (MSMg01no450_m10.g1)
ACC	AG538423	AG538424
length	775	777
length of high quality (start - end)	244 (73 - 316)	368 (78 - 445)
definition	CHROMAT_FILE: MSMg01no450_m10.b1 PHD_FILE: MSMg01no450_m10.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:20:49 2005	CHROMAT_FILE: MSMg01no450_m10.g1 PHD_FILE: MSMg01no450_m10.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:20:49 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTCTCATATTTGCGTCGCTAAACGAATCACATTTCAAACAGGATCCGCGG AANNCNNTGTTCACATCAGAACCCCTTTTTAATGGGGTTATTTGATTTTC TAGAGTCCACCATCTTGAGTTTGTTATATATATTGGATATTAGCCCTCTC TCAGATTTAGGATTGGTAAAAATTCTTTCCCAATCTGTTGGTGGCCTTTT TGTCTTATTGACAGTGTCTTTTGCCTTAAAGAAGCTTTGCAATTTTATGA TTTCCTATTCGTCAATTCTTGATCCTACAGCACAAGTCATTGCCATTCGG TTTAGGAATTTTTCTTTCGTGCTCATATCTTCGAGGTTTTCCCCAGTGTA TCCTCTATAAATTTCAGTGCCTCTGGTTTTATGTGTAGGTCTTTGATCCA CTTACAGTATAGATTTGTACTAGGAGATAATAATGCATTATTTCGCATTC TTCTACCTGATACCTTCTTTTTTTGCCAGCTCCATTTGTACTATATGCTA TCTTTTTTCCACTGCACGTTTTTAGTTCCCTTGTCTCACATTTTATATTT TTTTTTGTACACTTCCCATCTCTCCTCTCGCATCTTTCTGTTTCGTTCCC TTGTTCCTTCTCTCTGCCCTCTTTCTATTTCCTTCTTTTTTTTCCCTATT CCCCCTTTTTCTTCTTTTCTTCTCTTTTCTTCTTGACCCTTCTCTCTTTC TTCCCCTCTCCTCTCTTTTCCCTTTCCTTTTTCCCTCTCCCCCGCTTTTC ATTCTCTCTTTCCCTTCTCCCCCTC	GCGACTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXCTACTGTTAAGGGAATTTAAGAC ACAGTAGACTCTTGAGATGAGAGAGAGAGAAATAAAGAATAGAAAAGGGA AGAAGGAAGGGAAGAAGGACAAAAAAGGAAGGAAACAAGGCGGGAAGGAA GAAGGAAGGAAGAAAATATCCATCCTTATGTTTTTCTAATTTTATACTGA TCATGATATCTTTAAGGGCAATGGAACATGTTCGTCCTTGTGGAAAACTG ATGACTGATTACATATGCACATATGTGTATAATGTTCTAGTCTGCCATAG TAAAGACCTAATCTGAAGATGTATTTGCACTGCCATTTAACATCCTGATT AACTACTGGGCGTATGTGTCTGAAATGGTGTATAGAGAAGTTAATTATTA ACGTGTATGACTAGTTTCCCTATTTCCCTTTCCATTAACAAAGCATGTCT TTTGCTTTCCTTCATGCTTGATTGCATTTTCCCTTTTTGTTCACCAACTG TTATTTTTGTCTAGCACTGACTAATCTCACACACCTCCTGGCATTTGCCT CTTGGCTCCTCACCTGTTCTCGGCTTCCTTCCAATTTGTCTCCTCCGTGC GATATCTTTATTAGTCTCCATGTCTCACACCCCCCCCCCTTGTTGTTACT CTACCATCTCACTTTCTTGTACCCCTGCGCTCCCTTTCCCCCTCTCTCCT CCATTTCCCTTTTCCCTCCTTTTGCTG
quality values	Open. Hide. 13 15 15 10 10 8 8 8 8 8 12 12 10 8 8 6 6 6 8 7 8 8 7 8 9 7 7 6 6 8 6 6 7 9 11 9 9 12 11 11 10 10 9 9 9 9 11 27 27 23 17 3 0 0 3 0 0 3 6 6 7 6 6 6 9 9 8 8 8 8 12 10 22 28 26 28 34 37 37 33 33 33 33 34 33 39 30 30 30 40 40 48 42 47 42 42 48 48 57 57 57 57 54 50 48 42 41 41 36 41 41 41 41 41 44 44 31 18 18 14 12 15 12 12 24 34 48 57 57 54 54 54 44 44 35 37 42 42 42 42 57 37 43 57 57 57 57 57 57 47 42 50 37 37 37 57 57 57 43 24 16 16 24 27 27 43 43 35 43 43 52 57 57 57 57 57 57 59 57 52 43 43 43 52 52 59 59 59 44 35 32 32 35 43 43 57 57 59 59 57 50 50 50 37 46 52 57 57 50 44 37 35 35 37 43 52 50 43 52 50 43 43 33 33 33 43 43 33 33 31 41 41 27 23 23 44 36 42 37 37 42 42 43 43 44 44 34 32 15 18 18 18 18 30 30 43 57 57 57 48 57 47 59 41 41 43 59 59 57 57 59 59 46 46 37 30 25 25 25 37 36 36 28 28 16 16 16 19 19 23 37 32 43 43 47 43 43 39 37 32 28 23 32 23 23 23 28 28 39 39 30 27 22 10 9 9 9 9 9 9 9 9 9 11 11 23 23 39 46 59 47 39 32 32 28 23 25 28 34 41 39 30 30 28 28 19 19 19 15 15 23 24 32 19 23 15 15 10 19 15 22 22 19 19 12 12 9 8 8 8 12 19 37 39 39 32 34 18 24 21 28 28 13 10 8 8 8 10 14 28 28 24 23 18 15 12 12 18 12 10 10 22 12 8 8 8 8 10 11 11 12 12 14 28 28 20 20 10 13 10 8 8 8 12 12 11 11 11 12 12 15 21 22 24 17 15 15 12 11 10 10 13 15 12 12 9 9 9 11 15 19 12 12 10 17 13 10 10 10 10 8 8 8 8 8 10 11 12 12 15 15 15 15 15 18 18 11 9 8 8 10 8 8 9 11 19 11 8 8 8 10 8 8 10 10 13 19 12 13 12 23 19 28 25 15 13 8 8 8 8 10 23 13 10 8 8 6 9 9 10 14 14 9 8 8 8 8 11 13 18 19 16 19 8 8 8 8 8 8 13 13 10 8 8 8 8 12 13 9 9 9 9 18 10 15 12 11 9 7 8 8 8 10 8 8 8 8 8 8 8 8 8 9 13 13 13 10 10 8 8 8 8 9 9 12 15 16 16 10 10 10 13 18 12 12 11 11 11 10 10 8 6 6 6 10 13 22 22 21 19 11 11 11 11 14 15 18 18 16 20 18 14 16 10 10 9 9 9 9 16 15 13 12 12 16 16 15 19 15 16 19 19 17 17 10 13 10 9 9 13 19 19 16 10 10 12 15 20 14 16 12 15 9 9 9 13 23 22 30 28 30 17 13 13 8 8 8 9 10 12 17 10 15 8 8 8 8 18 15 12 12 10 10 12 17 15 15 15 9 9 6 8 8 8 8 8 10 8 11 8 10 10 10 10 13 12 10 9 9 9 11 11 11 13 9 8 8 8 13 10 18 15 25 12 12 12 12 12 12 14 13 18 8 10 9 12 16 15 15 10 10 10 8 12 10 10 8 8 8 8 8 8 8 8 10 9 9 11 11 16 15 8 6 6 6	Open. Hide. 6 6 6 6 6 7 10 8 11 9 12 3 0 3 10 9 9 8 7 6 6 8 8 19 18 3 0 3 19 21 18 11 11 9 10 10 9 9 9 8 9 10 10 11 11 15 10 15 23 29 32 31 20 20 32 29 37 29 23 15 9 9 9 15 15 15 19 11 13 23 20 16 16 18 23 37 37 41 41 41 41 48 48 48 48 50 50 50 59 31 31 30 29 28 29 17 17 9 9 9 9 19 19 37 37 37 24 24 30 30 47 39 41 59 57 28 25 19 18 11 11 18 24 28 39 39 39 43 37 33 35 30 30 33 30 35 17 15 9 9 9 17 13 29 32 37 32 26 31 30 32 26 29 24 24 28 37 32 47 37 37 39 39 33 33 37 17 15 10 10 10 15 22 37 39 43 47 47 43 43 39 39 32 33 33 28 28 33 39 39 39 32 30 28 37 37 37 37 37 39 36 36 32 29 29 37 41 39 39 41 39 39 39 24 22 22 28 23 23 41 36 36 36 43 47 48 48 59 59 59 59 59 59 59 59 57 47 47 53 48 48 48 57 57 54 54 40 43 30 22 22 34 34 48 57 57 57 57 59 68 68 57 54 54 48 48 48 48 48 43 42 43 39 39 35 36 37 40 34 38 42 42 36 36 48 48 48 59 46 46 46 43 37 37 30 25 25 37 37 41 47 40 40 40 48 48 48 50 50 47 47 39 39 39 43 43 43 40 40 28 32 22 23 12 10 8 11 8 8 8 15 18 24 31 34 39 43 39 39 39 31 31 32 31 33 37 34 46 39 34 28 23 20 18 30 30 37 37 37 40 40 32 41 32 34 28 41 41 48 57 43 48 48 48 48 43 40 39 35 35 47 43 43 48 48 48 36 34 25 25 25 31 34 41 59 46 41 41 39 39 28 28 32 40 34 37 32 28 23 31 30 36 43 43 39 37 33 30 30 28 30 28 22 20 23 12 10 9 10 10 13 23 34 23 23 23 28 28 28 28 28 29 24 19 24 12 13 18 21 12 12 11 11 11 11 11 12 12 14 9 9 8 8 10 10 10 19 32 41 39 36 33 18 13 13 13 10 11 8 10 10 23 18 17 17 19 12 10 10 10 10 19 13 17 13 18 11 19 19 19 17 16 11 13 13 15 23 22 12 12 11 10 9 9 9 14 15 23 13 13 12 17 17 10 11 10 10 10 11 25 19 30 18 14 12 12 11 14 17 13 13 10 11 11 12 12 12 12 18 19 11 12 12 12 8 8 8 10 8 8 9 9 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 9 10 10 10 10 9 8 8 8 8 8 12 12 12 12 12 12 10 8 8 8 10 15 10 10 10 8 8 8 10 8 9 9 9 9 9 8 8 17 17 11 10 9 8 8 8 8 9 9 9 13 10 11 10 8 8 6 6 6 6 15 18 26 14 16 18 10 8 8 8 8 8 8 10 10 8 6 8 7 7 12 10 8 8 8 8 8 8 10 9 9 9 9 9 9 10 8 8 8 8 8 7 9 10 10 10 11 12 13 21 20 19 15 13 10 8 8 8 8 8 8 8 8 8 8 8 8 12 8 8 8 10 8 8 8 8 8 10 6 6 6 6 8 8 10 13 15 14 13 10 6 8 6 8 8 8 10 8 9 15 8 9 9 8 8 8 8 8 8 10 10 13 10 10 10 8 8 8 8 9 9 17 17 14 11 11 11 10 13 9 9 9 9 16 16 15 8 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no450_m10.g1 MSMg01no450_m10.g1 CHROMAT_FILE:
MSMg01no450_m10.g1 PHD_FILE: MSMg01no450_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:49 2005
         (368 letters)



>mm_chr5_69124274_69125040
          Length = 767

 Score =  623 bits (322), Expect = 0.0
 Identities = 357/370 (96%), Gaps = 5/370 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctactgttaagggaatttaagacacagtagactcttgagatgagagagagagaaataaag 60
           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 201 ctactgttaagggaatttaagacacagtagactcttgagat--gagagagagaaataaag 258

                                                                       
Query: 61  aatagaaaagggaagaaggaagggaagaaggacaaaa--aaggaaggaaacaaggcggga 118
           || ||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||
Sbjct: 259 aaaagaaaagggaagaaggaagggaagaaggaaaaaaagaaggaaggaaacaaggcggga 318

                                                                       
Query: 119 aggaagaaggaaggaagaaaatatccatccttatgtttttctaattttatactgatcatg 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 319 aggaagaaggaaggaagaaaatatccatccttatgtttttctaattttatactgatcata 378

                                                                       
Query: 179 atatctttaagggcaatggaacatgttcgtccttgtggaaaactgatgactgattacata 238
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 379 atatctttaagggcaatggcacatgttcgtccttgtggaaaactgatgactgactacata 438

                                                                       
Query: 239 tgcacatatgtgtataatgttctagtctgccatagtaaagacctaatctgaagatgtatt 298
           |||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 439 tgcacatatgtg-agaatgttctagtctgccatagtaaagacctaatccgaagatgtatt 497

                                                                       
Query: 299 tgcactgccatttaacatcctgattaactactgggcgtatgtgtctgaaatggtgtatag 358
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 498 tgcactgccatttaacatcctgattaactactgggcgtatgtgcctgaaatggtgtatag 557

                     
Query: 359 agaagttaat 368
           ||||||||||
Sbjct: 558 agaagttaat 567


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 767
Length adjustment: 9
Effective length of query: 359
Effective length of database: 758
Effective search space:   272122
Effective search space used:   272122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information