ACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTTACTGGTTGGTGCTTCGATGAGTAAACTTCTGTCTTTAA
TTGTAGAAGAAATATGGACTGAATTATTTCTGCTTTTTGGAATTCAGATT
CCTTCAAAGACCAGCTTGGCATTAGTTTCTGCACTCTCATGAATGTTTGG
AGAGGAAAGCTCGTTTAAGAGAGCAAACCTCCTCGCATGTATGTATACGC
AGACTTGACATGTCATCATATGACAGTGACGTGTTACTCACTGCAATCAA
GCTTACGTGTAGTTTAACTTATGCATAAAGTATCATGCTTTCTCATAGAT
CTCAGCATTTTTTCCTCATAAAATAATATTCATTTTCCTGGTTAATGTTT
CTTTGCGATTTGTGTTGTTGTTTTGAGATGGGCCTTCAATGGCTGGCCTA
GGCTGCCCTCAAACTTGCAATCCTCCTGCCTCAGCCTGCTGAGTGCAGCG
ATTACAGGCACATACTACCATCTTAACTTGAATCTTTAAAGCTCTGCTGC
TAACTCCCCTGCCTTTTTTCTCCTTTGTTTATGCATTTTTGTGGAATCAC
TTTATCGATCCCTGCATCTTAAACCTTAGTTGTGTTTTATGTGTAGTATG
TAGCTAGCTTCTAGTTTATTTTTGTTTTTTCAAGTTAGCCTGTTTCTCCA
GGTAGCCCTGTGTGGACGTTTGAATAAAAATGGCCCCTATAGGGCCCATT
GTGAGTGGTGG

CCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATACTAGCAAAACCAAGGAAACAC
ACACATACACACACAAACACTACTAACAACAAAACAACAGGAAATAACAA
TCACTGGTCATTAATATTTTTCAACACCAGTGGACTCAATCCTCCCTACC
CCCCAAAAGAGACACAGGCTAACAGAATAGATGTGAAATCAGGACCCATC
ACTCCGCTGCACACAAGTAATACACCTGAATAATAAAGATAGCCATTACC
TCAGAGCAAAGGGCTGGAAAAAAAGTTGTCTAAGCAAACAGACCCAGAAG
CAAGCTGCAATAGCCATTCTAATATCTGATAAAATAGACTTTCAACCAAA
ATAAATCAAAAGAGATGGGGAAGGACACTTAATATTCATCAAAGGAAAAA
ATCTACTAAGATAATATCTAAATTCTGAACATTTATGTCCCAAACACAAG
GGGAACCCATATTTGTAAGAGAAACATTGCTAAAGCTTAAATTGCACATT
GAACCCAACACATTAATAGTGGAAGACTTCAATACCTCACTTTCAACTGA
CAGGATATCCAGACAAAAACTAAACAGAGTAATAATGAAACTAACAGACA
TTATGAATCAAATGGGCCTAACAGACAGCTATAGAATATTTCACCCAAAC
ACAAAAGAATAAGCCTTCTTCTCAGCACCTCATGGATCCTTCTCTAATAT
TAATGATATAGTCAG

Query= MSMg01no453_f15.b1 MSMg01no453_f15.b1 CHROMAT_FILE:
MSMg01no453_f15.b1 PHD_FILE: MSMg01no453_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:12 2005
         (690 letters)



>mm_chr5_21055028_21056124
          Length = 1097

 Score =  992 bits (513), Expect = 0.0
 Identities = 559/577 (96%), Gaps = 7/577 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgttt-tactggttggtgcttcgatgagtaaacttctgtctttaattgtaga 63
           |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gaattctttgtttaaagtggttggtgcttcgatgagtaaacttctgtctttaattgtaga 518

                                                                       
Query: 64  agaaatatggactgaattatttctgctttttggaattcagattccttcaaagaccagctt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 agaaatatggactgaattatttctgctttttggaattcagattccttcaaagaccagctt 458

                                                                       
Query: 124 ggcattagtttctgcactctcatgaatgtttggagaggaaagctcgtttaagagagcaaa 183
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 457 ggcattagtttctgcactctcatgcatgtttggagaggaaagctcgtttaagagagcaaa 398

                                                                       
Query: 184 cctcctcg----catgt--atgtatacgcagacttgacatgtcatcatatgacagtgacg 237
           ||||||||     ||||  |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 397 cctcctcgtgtaaatgtgcatgtatacacagacttgacatgtcatcatatgacagtgacg 338

                                                                       
Query: 238 tgttactcactgcaatcaagcttacgtgtagtttaacttatgcataaagtatcatgcttt 297
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 337 tgttactcactgcaatcaagcttacatgtagtttaacttatgcataaagtatcatgcttt 278

                                                                       
Query: 298 ctcatagatctcagcattttttcctcataaaataatattcattttcctggttaatgtttc 357
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||
Sbjct: 277 ctcatagatctcagcattttttccacataaaataatattcattttcctggttaatatctc 218

                                                                       
Query: 358 tttgcgatttgtgttgttgttttgagatgggccttcaatggctggcctaggctgccctca 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tttgcgatttgtgttgttgttttgagatgggccttcaatggctggcctaggctgccctca 158

                                                                       
Query: 418 aacttgcaatcctcctgcctcagcctgctgagtgcagcgattacaggcacatactaccat 477
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 157 aacttgcaatcctcctgcctcagcctgctgagtgcatcgattacaggcacatactaccat 98

                                                                       
Query: 478 cttaacttgaatctttaaagctctgctgctaactcccctgccttttttctcctttgttta 537
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 97  cttaacttgaatctttaaagctctgctgctaactcccctgcctttgttctcctttgttta 38

                                                
Query: 538 tgcatttttgtggaatcactttatcgatccctgcatc 574
           |||||||||||||||||||||||||||||||||||||
Sbjct: 37  tgcatttttgtggaatcactttatcgatccctgcatc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1097
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1087
Effective search space:   739160
Effective search space used:   739160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)