NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTATCAATCCTTCCAAGATGACCTAATACCAATGCCATGTTCCTC
AGGAGGAAGCCTCTCTGATGATGCCTGAACAAGGCACTGATCTATGAGAA
AAAGAAGAATCTCACCAGGAGTCATTTTACTACTACATTTTTGTTGTTTT
TTAGACCAATAGTATTTGGTTTTAGCCTAGGTCCCTGGGTTATCTCGTCT
CGAGTTCTTGGTCACCTAAGCAGTATCAGGTATGGTTCCTTCTCATGGAG
TAGACCTAAAGTTAAAACAGACATTGGTTGGTGGCCACAAGCTTTGTGCC
ACCATTGCTCTAGGATATCTCAGGCAGGACACCACAAGTAATATCCACAC
ATATGCTAATCCATACCACATTGTCGATACAAAGGGTTTTGGTCTGAGTT
AGTGTTTACATTTCTCTTTTGGTAGTGTGCAAAGTTTCTTCCTGTACCAA
AGATACTAGAACACAGGGCTGAAGGTTCTATGTAGGCACCAGCTCTGCTT
CTTCATGTTCAATGAGCTGTGTAGGTGTTATCTTCAGCAATGAGGTCTTG
CCATCAGTTTACAGAGAATAACCTATAGTCCTAGCAACTGTCTGGGTTGT
TTGGGATTTCCGTGGGAGCCCTTTGGCCAACGACTCAATTATATGTATCC
CAGGACTGAAAGCTGCACTTGGTGAAAAGAGATAGCCAGCTGGAACTCCG
TCTGCCCTATTATTC

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCAGTGACAATGGTCTCTAGGAGATG
ACGCCACACTTAGATTTGCTCTGTCCAGAACACCCTTCCTTCCCTATCCT
GAAAGGCTAGCAAAGCCCTTCGCAAGCTCTAGCTCTGAGGCTGGGGACAA
GCCCTTCATGGGGACAGCCCTCTATACTGGTCTCAGAGGCTATAACCCTT
GTGTCTCACTTCTCCCCATGAATACCGTTTCCTGCAAGCTGAGCTGCACA
CCTTGGGTTTCTGCATTTAGCTCAGGACCTGCTCAATTCAAGTTGACTGG
AAAAGACTGTATAGACCTTTAAAAGAACAAGAAGAAGAAGAAGAAGAAGA
AAAAAAGCAATCCCCTACACAGAGAGCCGCAATAAAGAAAATGTGTTCTA
CTACCACCTTGGGACCTCAATTAATGTGCTTCTCTTCTCGTGAGTCCTCG
CTTCAAACAAACAGAATCTGACAGGCCGAATTAAATCATTTATCTTTCTA
GTTCTCTGCCTTGGCTCTAACGCTAGTGTAAAAGCCCTGATATTTCATAA
GAAAGTGGCAAAAACAAGAGCTGAGGCCTGGGCCCTCGACTTTTATCTGC
TTGTGTGGTCCATAAATACAGATAATATGGGAGAAAGGGTTTGCTCCCGA
TGCAGCTGTTACCCAGGCAGAATTAAATACCAAGTTACCATAGACTGTGT
GTGTGTGTGTG

Query= MSMg01no453_i15.g1 MSMg01no453_i15.g1 CHROMAT_FILE:
MSMg01no453_i15.g1 PHD_FILE: MSMg01no453_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:27 2005
         (673 letters)



>mm_chr5_52515626_52516698
          Length = 1073

 Score = 1228 bits (635), Expect = 0.0
 Identities = 658/669 (98%), Gaps = 6/669 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgacaatggtctctaggagatgacgccacacttagatttgctctgtccagaacacccttc 64
           ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 tgacaatggcctctaggagatgacgccacactcagatttgctctgtccagaacacccttc 264

                                                                       
Query: 65  cttccctatcctgaaaggctagcaaagcccttcgcaagctctagctctgaggctggggac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttccctatcctgaaaggctagcaaagcccttcgcaagctctagctctgaggctggggac 324

                                                                       
Query: 125 aagcccttcatggggacagccctctatactggtctcagaggctataacccttgtgtctca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagcccttcatggggacagccctctatactggtctcagaggctataacccttgtgtctca 384

                                                                       
Query: 185 cttctccccatgaataccgtttcctgcaagctgagctgcacaccttgggtttctgcattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttctccccatgaataccgtttcctgcaagctgagctgcacaccttgggtttctgcattt 444

                                                                       
Query: 245 agctcaggacctgctcaattcaagttgactggaaaagactgtatagacctttaaaagaac 304
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctcaggacctgctcaatacaagttgactggaaaagactgtatagacctttaaaagaac 504

                                                                       
Query: 305 aagaagaagaagaagaagaagaaaaaaagcaatcccctacacagagagccgcaataaaga 364
           ||||||||||||||||||      ||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagaagaagaagaagaag------aaaagcaatcccctacacagagagccgcaataaaga 558

                                                                       
Query: 365 aaatgtgttctactaccaccttgggacctcaattaatgtgcttctcttctcgtgagtcct 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaatgtgttctactaccaccttgggacctcaattaatgtgcttctcttctcgtgagtcct 618

                                                                       
Query: 425 cgcttcaaacaaacagaatctgacaggccgaattaaatcatttatctttctagttctctg 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 619 cgcttcaaacaaacagaatctgacaggccgaattaaatcatttatctttctagttctccg 678

                                                                       
Query: 485 ccttggctctaacgctagtgtaaaagccctgatatttcataagaaagtggcaaaaacaag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ccttggctctaacgctagtgtaaaagccctgatatttcataagaaagtggcaaaaacaag 738

                                                                       
Query: 545 agctgaggcctgggccctcgacttttatctgcttgtgtggtccataaatacagataatat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agctgaggcctgggccctcgacttttatctgcttgtgtggtccataaatacagataatat 798

                                                                       
Query: 605 gggagaaagggtttgctcccgatgcagctgttacccaggcagaattaaataccaagttac 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 799 gggagaaagggtttgctcccgatgcagctgttacccaggcagaattaaatatcaagttac 858

                    
Query: 665 catagactg 673
           |||||||||
Sbjct: 859 catagactg 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space:   704769
Effective search space used:   704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)