AAAATTTGCNNCCGCTAAACAACTCACTTTCCAAAGAGGATCCGCGGAAT
TCTCATTGCACAAATCTTGAGTAGCTGANAAGCACCAATGGAGGAGCTAG
ATAAAGTGCCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAA
CAATATGAACTAACCAGTACCCCCGGAGCTCATGTCTCTAGCTGCTATGA
TCAAAGAGCCTANTGNCTCATGGAAAAAACCATTGGCCGCAACTTTATTC
TCATCGGGGACCCCCCCCAACAAAAGGATGGGTTGTTGCCNCCTAGATTT
GANNNNNNNNNNNNNNNNNNNNNNNNNNNNCTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGNNNNGNNNNNNGGCTGGGGGGGGGGGGGTGTGG
TGTTCTGGGGTGGCTGTTTGTGTTGTGTGGGGTTGTTCTTGGGTTTGTTT
GTGTCTGTTGGTTGTGTGGTGTCTGTGGGGGGGGAGGGGGCTGGAGGAGA
AGGGGAGAGGGGGGGGGCTGGGGGGGGCTNNNNNNNNNNNNNNNNNNNNN
ANNNNNNGNNGGGGGGGGGTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNANNANGAATGGAGGAGAGGGGCTGGGGGGGGGGGGGGGGGGGGG
CTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAANNANANAAAAAAGAAAANNNTCCNNNNNNNNNANNNNANNNNNNN
AANNANNANNNNNNNNAAAAANNNNNANNNNNNNANNNNNANAAAANNNN
NAAAAAAAAAAAAAAANNNNNNNNAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAANAAANNNNNANAANAAANANNNNNNNNNNNNAAAAAAATTTT
TTAATTATATATG

AATGCTGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATGAATTTTCATGACATATTTTTTT
CTCTTTAAAGTAGAGACGTACACCACAAACTATAATAAATGTAACCTTTA
TTAAACTCAGGAAATGTAGAATTATTTAGGACTTGATGGGAAATAGCAAT
ATTTAGAAAATATTGCTTACATTATGATAAGAACTTTATTTTAAATATTA
AAGCAAAAGCTATGAAATGCAATTCAGTGAAAAGTTAGATAACTTAAAAC
TTCTGAGTCTAATGTTAATCATGTTATTAGAAGCTTTGGTTTATGTTTTT
TTTTTTTTTAACCTCATCTTTCTCCTTCCTGCCATGGCTATACGGGCACA
GGTATTGCAGATCAGAATAATAAACTGACCATTCACTCAGTGATGTGTCA
CAGTCCCCAAGGCTGTCACTTTTCACTGCAGGCTATAAAGCAAGACTGTC
TTACTCAGCTATGTCATGAGTTTGAAGTGTCCTTCAGGAGGAGCATGTTT
CGAATGCTAGCTATACAGATCATGACACAATTCCGAAGGCTGAGGCATGG
ATAACATGTAAGGTCTGGGTGGCAGGAATACGTTTCTGGGAGTTTAGGTT
ATTATTGGGTTACCATTTTTCCTAAAGGAGGGAATTTAGCCCAAAAGCTA
CCCCCCCCCTTAGAATCTTGAAAAAAAGTGCTAGGAGGTATAAAAAGG

Query= MSMg01no455_a17.g1 MSMg01no455_a17.g1 CHROMAT_FILE:
MSMg01no455_a17.g1 PHD_FILE: MSMg01no455_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:26 2005
         (526 letters)



>mm_chr5_85534855_85535778
          Length = 924

 Score =  978 bits (506), Expect = 0.0
 Identities = 521/526 (99%), Gaps = 2/526 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgaattttcatgacatatttttttctctttaaagtagagacgtacaccacaaactata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aatgaattttcatgacatatttttttctctttaaagtagagacgtacaccacaaactata 665

                                                                       
Query: 61  ataaatgtaacctttattaaactcaggaaatgtagaattatttaggacttgatgggaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ataaatgtaacctttattaaactcaggaaatgtagaattatttaggacttgatgggaaat 605

                                                                       
Query: 121 agcaatatttagaaaatattgcttacattatgataagaactttattttaaatattaaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agcaatatttagaaaatattgcttacattatgataagaactttattttaaatattaaagc 545

                                                                       
Query: 181 aaaagctatgaaatgcaattcagtgaaaagttagataacttaaaacttctgagtctaatg 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 544 aaaagctatgaaatgcaattcagtgaacagttagataacttaaaacttctgagtctaatg 485

                                                                       
Query: 241 ttaatcatgttattagaagctttggtttatgttttttttttttttaacctcatctttctc 300
           ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 484 ttaatcatgttattagaagttttggtttatgttttttttttttt-aacctcatctttctc 426

                                                                       
Query: 301 cttcctgccatggctatacgggcacaggtattgcagatcagaataataaactgaccattc 360
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 425 cttcctgccatggctatacgggcacaggtatagcagatcagaataataaactgaccattc 366

                                                                       
Query: 361 actcagtgatgtgtcacagtccccaaggctgtcacttttcactgcaggctataaagcaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 actcagtgatgtgtcacagtccccaaggctgtcacttttcactgcaggctataaagcaag 306

                                                                       
Query: 421 actgtcttactcagctatgtcatgagtttgaagtgtccttcaggaggagcatgtttcgaa 480
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 305 actgtcttactcagctatgtcatgagtttgaagtgtccttcagg-ggagcatgtttcgaa 247

                                                         
Query: 481 tgctagctatacagatcatgacacaattccgaaggctgaggcatgg 526
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tgctagctatacagatcatgacacaattccgaaggctgaggcatgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 924
Length adjustment: 10
Effective length of query: 516
Effective length of database: 914
Effective search space:   471624
Effective search space used:   471624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)