Query= MSMg01no455_h07.b1 MSMg01no455_h07.b1 CHROMAT_FILE:
MSMg01no455_h07.b1 PHD_FILE: MSMg01no455_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:58 2005
(526 letters)
>mm_chr5_135502162_135503087
Length = 926
Score = 323 bits (167), Expect = 2e-92
Identities = 173/175 (98%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 1 gggtagcctcaaactacatgcagttcttctgcttctgagtcccagtgctgggatttcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gggtagcctcaaactacatgcagttcttctgcttctgagtcccagtgctgggatttcggg 467
Query: 61 cgtgcacggttgcaagctcagtttacctagagattggggtggaagtcaggtccttgctga 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 catgcacggttgcaagctcagtttacctagagattggggtggaagtcaggtccttgctga 527
Query: 121 tcatacgactctaccaact-gaacaacagccccagccccaggccttcattttctt 174
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 528 tcatacgactctaccaacttgaacaacagccccagccccaggccttcattttctt 582
Score = 302 bits (156), Expect = 5e-86
Identities = 165/168 (98%)
Strand = Plus / Plus
Query: 359 ccagcccccggccttcattttcttctggagaattctgttcccatgaaaacacagagtgtt 418
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ccagccccaggccttcattttcttctggagaattctgttcccatgaaaacacagagtgtt 618
Query: 419 cccagatcactggtcacttctgggtggggctagcatgacccagggacctactacaggcag 478
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 619 cccagatcactggtcacttctgggtggggctagcatgacccagggatctactacaggcag 678
Query: 479 tagaggataggtgttgcaggggcagtcagagcaagccagcctgaaagt 526
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 679 tagaggataggtattgcaggggcagtcagagcaagccagcctgaaagt 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_h07.g1 MSMg01no455_h07.g1 CHROMAT_FILE:
MSMg01no455_h07.g1 PHD_FILE: MSMg01no455_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:58 2005
(182 letters)
>mm_chr5_135617289_135617870
Length = 582
Score = 337 bits (174), Expect = 3e-97
Identities = 177/178 (99%)
Strand = Plus / Minus
Query: 1 tgtattgttactatagagggagttatacatcctgggggagcaggcaaggtagtgccgggg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 378 tgtattgttactatagagggagttatgcatcctgggggagcaggcaaggtagtgccgggg 319
Query: 61 gatacatgcctggctcaccctggaaagaaagggaggcagatacagaggaggacctcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gatacatgcctggctcaccctggaaagaaagggaggcagatacagaggaggacctcagca 259
Query: 121 gcaagctagaagctggtagtttgtaccacagtaagtggatacattggctgatgaagac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gcaagctagaagctggtagtttgtaccacagtaagtggatacattggctgatgaagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
