Query= MSMg01no456_i09.b1 MSMg01no456_i09.b1 CHROMAT_FILE:
MSMg01no456_i09.b1 PHD_FILE: MSMg01no456_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:22 2005
(201 letters)
>mm_chr5_73912104_73912703
Length = 600
Score = 381 bits (197), Expect = e-110
Identities = 200/201 (99%), Gaps = 1/201 (0%)
Strand = Plus / Minus
Query: 1 aaagcacactgaattagacacttagaatgtatcgacttgatggatctaaataaagtcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aaagcacactgaattagacacttagaatgtatcgacttgatggatctaaataaagtcatt 341
Query: 61 aaaaggccaagaatcagactcaaaaacttcacctaactgccaatgcttaaactggctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaaaggccaagaatcagactcaaaaacttcacctaactgccaatgcttaaactggctttt 281
Query: 121 ccatagcacagtatcataccaaattatgctgaagaaaaaaaaaatacaacacagatacct 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 280 ccatagcacagtatcataccaaattatgctgaag-aaaaaaaaatacaacacagatacct 222
Query: 181 acatgaatgtgagaatttatc 201
|||||||||||||||||||||
Sbjct: 221 acatgaatgtgagaatttatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 600
Length adjustment: 8
Effective length of query: 193
Effective length of database: 592
Effective search space: 114256
Effective search space used: 114256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no456_i09.g1 MSMg01no456_i09.g1 CHROMAT_FILE:
MSMg01no456_i09.g1 PHD_FILE: MSMg01no456_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:22 2005
(243 letters)
>mm_chr5_73782761_73783403
Length = 643
Score = 431 bits (223), Expect = e-125
Identities = 238/247 (96%), Gaps = 8/247 (3%)
Strand = Plus / Plus
Query: 1 catagaatagtcattgtctgcgtgctggccgcgtttgtgcagtcactgtacaatgacgac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 catagaatagtcattgtctgcgtgctggccgcgtttgtgcagtcactgtagaatgacgac 260
Query: 61 ggtacacccctaacaatgttcacaagagaaacagttctgaggggtttctttcgtagttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtacacccctaacaatgttcacaagagaaacagttctgaggggtttctttcgtagttcc 320
Query: 121 tgaatcagacagccatgtcccaatagcagtactttaactcctgtgccttggtgctggggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaatcagacagccatgtcccaatagcagtactttaactcctgtgccttggtgctgggg- 379
Query: 181 ttt----agagagtggccctctcggaacaccagctcgtggactgcatcacacctggtctg 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ---gcaaagagagtggccctctcggaacaccagctcgtggactgcatcacacctggtctg 436
Query: 237 aagatga 243
|||||||
Sbjct: 437 aagatga 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
