Query= MSMg01no458_c23.b1 MSMg01no458_c23.b1 CHROMAT_FILE:
MSMg01no458_c23.b1 PHD_FILE: MSMg01no458_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:42 2005
(534 letters)
>mm_chr5_126386558_126387490
Length = 933
Score = 994 bits (514), Expect = 0.0
Identities = 529/534 (99%), Gaps = 2/534 (0%)
Strand = Plus / Plus
Query: 1 gaattcttccctgtttgcttaaatttacccctctttgaaggtactgtaaatgggagtgtc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcttccctgtttggttaaatttacccctctttgaaggtactgtaaatgggagtgtc 260
Query: 61 tccttcatttctttttgcaatagatcaagttaatgcacagaaacaaacatcctttgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccttcatttctttttgcaatagatcaagttaatgcacagaaacaaacatcctttgtgtg 320
Query: 121 tttgatttttggctcctgtaacttcgctgatttctaactgcagtttgggttggcatctaa 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggtttttggctcctgtaacttcgctgatttctaactgcagtttgggttggcatctaa 380
Query: 181 ggtgtttttttctacatgacatctgccagagtccgtttcccttcgcccttcagcttggat 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgtttttt-ctacatgacatctgccagagtccgtttcccttcgcccttcagcttggat 439
Query: 241 tctatatttatttttcagttttgtcttttctttccccctttctctcccctgcctctctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctatatttatttttcagttttgtcttttctttccccctttctctcccctgcctctctat 499
Query: 301 gtgggccctgggaattgaacctgggtcctccaaaagggcagctagtgctcttaagtgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtgggccctgggaattgaacctgggtcctccaaaagggcagctagtgctcttaagtgctg 559
Query: 361 agccatctctccaaaagcgtttgttggattgtttatattatgaatctctagtgtttgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agccatctctccaaaagcgtttgttggattgtttatattatgaatctctagtgtttgaaa 619
Query: 421 gtgtgccaacaacataaggaagtaaaaactattttgagctaatgcaagtatggctccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtgtgccaacaacataaggaagtaaaaactattttgagctaatgcaagtatggctccttc 679
Query: 481 aggcaacacttctaatttttttttctcccagggctggaagggtgctgaatgggt 534
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 680 aggcaacacttctaatttttttt-ctcccagggctgggagggtgctgaatgggt 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 933
Length adjustment: 10
Effective length of query: 524
Effective length of database: 923
Effective search space: 483652
Effective search space used: 483652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_c23.g1 MSMg01no458_c23.g1 CHROMAT_FILE:
MSMg01no458_c23.g1 PHD_FILE: MSMg01no458_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:42 2005
(544 letters)
>mm_chr5_126525531_126526474
Length = 944
Score = 687 bits (355), Expect = 0.0
Identities = 373/379 (98%), Gaps = 1/379 (0%)
Strand = Plus / Minus
Query: 1 attcctttcatctaacagagactttgtgtcctttcacaagtcctctttagcccttcctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 attcctttcatctaacagagactttgtgtcctttcacaagtcctctttagcccttcctgc 319
Query: 61 atcctacccatggtagttttctccacggaagtcaccttggacaattaactagtgaatgaa 120
||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 318 atcctactcatggtggttttctccacggaagtcaccttgaacaattaactagtgaatgaa 259
Query: 121 gacgtatttatttttggataaaatgcagcttaattggtttctgtgagcctcctttcagtc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaagtatttatttttggataaaatgcagcttaattggtttctgtgagcctcctttcagtc 199
Query: 181 agcatattgtcttatttcatgtgtgtttccgttagaaaatcatataatttgctatatgct 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 198 agcatattgtcttatttcatgtgtgtttccgtta-aaaatcatataatttgctatgtgct 140
Query: 241 gttgactgataccagactcatggccagtactatgacaacatgaacccaagtaagaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gttgactgataccagactcatggccagtactatgacaacatgaacccaagtaagaattct 80
Query: 301 ttctcctagccagaggacaaaggtctgttttcttgcactagatggcatgtttgccttacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ttctcctagccagaggacaaaggtctgttttcttgcactagatggcatgtttgccttacc 20
Query: 361 tgtcaaatctatgttaaaa 379
|||||||||||||||||||
Sbjct: 19 tgtcaaatctatgttaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
