Query= MSMg01no459_e19.b1 MSMg01no459_e19.b1 CHROMAT_FILE:
MSMg01no459_e19.b1 PHD_FILE: MSMg01no459_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:10 2005
(382 letters)
>mm_chr5_114894975_114895756
Length = 782
Score = 629 bits (325), Expect = 0.0
Identities = 356/379 (93%), Gaps = 20/379 (5%)
Strand = Plus / Plus
Query: 4 ggaattcactctgttcaccaggcttgcctcgtacacccagagatccacctgcctctgcct 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggaattcactctgtagaccaggcttgcctcgtacacccagagatccacctgcctctgcct 283
Query: 64 ccacagtgctgggatgaaagatgttcacctccaagcccagccttcctggtgtttgtaact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ccacagtgctgggatgaaagatgttcacctccaagcccagccttcctggtgtttgtaact 343
Query: 124 aacatctagggaactttgtttctctctctctctctctctctctctctctctctctctctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aacatctagggaactttgtttctctctctctctctctctctctctctctctctctctctc 403
Query: 184 tctctctctctctctctctctctctctttttccttgcagaagtctcagaagccatgttgt 243
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 404 tctctctct--------------------ttccttgcagaagtctcagaagccatgttgt 443
Query: 244 cagaagccctgctggtgtccgccccggggaatgtcatcctccatggagaacacgctgtgg 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 cagaagccctgctggtgtccgccccggggaaggtcatcctccatggagaacacgctgtgg 503
Query: 304 tccatggcaaggtaaaaagtccccagggagctgggcagtggtggcgcatgcctttaatcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccatggcaaggtaaaaagtccccagggagctgggcagtggtggcgcatgcctttaatcc 563
Query: 364 cagttctgaatttgagacc 382
|||||||||||||||||||
Sbjct: 564 cagttctgaatttgagacc 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_e19.g1 MSMg01no459_e19.g1 CHROMAT_FILE:
MSMg01no459_e19.g1 PHD_FILE: MSMg01no459_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:10 2005
(369 letters)
>mm_chr5_115070181_115070949
Length = 769
Score = 690 bits (357), Expect = 0.0
Identities = 366/369 (99%)
Strand = Plus / Minus
Query: 1 cagggttctgattcatttaaccaggtgaggccctccagggtgtgcaggcattcccacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cagggttctgattcatttaaccaggtgaggccctccagggtgtgcaggcattcccacacc 510
Query: 61 ccacaggcttccagcagggacacaacatgcccagatccaggtgcctccagaggacagaat 120
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccactggcttccagcaggcacacaacatgcccagatccaggtgcctccagaggacagaat 450
Query: 121 ggtatgcctcttcctccgtctcccacccgcagaccccgtcagcctagcctgtgttctcga 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gggatgcctcttcctccgtctcccacccgcagaccccgtcagcctagcctgtgttctcga 390
Query: 181 aatattggccaagattgtgtcttacacttcagcctatcagcggacaggaagcagtaatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aatattggccaagattgtgtcttacacttcagcctatcagcggacaggaagcagtaatcg 330
Query: 241 acctaagtgggagagggcaacagggagatagtgacccctagtggatcaaagcagcatagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acctaagtgggagagggcaacagggagatagtgacccctagtggatcaaagcagcatagc 270
Query: 301 tctctgaccagagaggctgcagtatatgctatggtcctatccctcccccagaggaccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tctctgaccagagaggctgcagtatatgctatggtcctatccctcccccagaggaccttc 210
Query: 361 agcaatgcc 369
|||||||||
Sbjct: 209 agcaatgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
