Query= MSMg01no460_e19.b1 MSMg01no460_e19.b1 CHROMAT_FILE:
MSMg01no460_e19.b1 PHD_FILE: MSMg01no460_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:30 2005
(545 letters)
>mm_chr5_14567851_14568795
Length = 945
Score = 1031 bits (533), Expect = 0.0
Identities = 542/545 (99%)
Strand = Plus / Plus
Query: 1 gtgaatacagttcaaattaattaaacaagttccttttgcttggtaatagaaatacttttt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgaatatagttcaaattaattaaacaagttccttttgcttggtaatagaaatacttttt 260
Query: 61 tcaaatgtttgcttgcttctataagtaggtgatatatatttttgccgtggtttgatttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaatgtttgcttgcttctataagtaggtgatatatatttttgccgtggtttgatttca 320
Query: 121 tttggatgcctcattaatgatattaagactgcaaattaaaagtttattaggtaaatttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggatgcctcattaatgatattaagactgcaaattaaaagtttattaggtaaatttag 380
Query: 181 gatggaggttgcatattattaatattttagtgaagggtcggcttctggaattatgaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatggaggttgcatattattaatattttagtgaagggtcggcttctggaattatgaaaaa 440
Query: 241 gtattataaaataaaaataaggtacatgtatatttttaaagtagcttaaatatatttaaa 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaaaataaaataaaaataaggtacatgtatatttttaaagtagcttaaatatatttaaa 500
Query: 301 aatgtattcactttgctatttctcttaacagcagcatttttctttaagatagaaccaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgtattcactttgctatttctcttaacagcagcatttttctttaagatagaaccaggt 560
Query: 361 ttattttaagatcaaataaactctctaaatatactctgtagtcaaatgtggttatttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattttaagatcaaataaactctctaaatatactctgtagtcaaatgtggttatttttt 620
Query: 421 gtctccatctattttcctaaaattaacaatttttcaaggcatttccaaacaatatgattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtctccatctattttcctaaaattaacaatttttcaaggcatttccaaacaatatgattg 680
Query: 481 ttaaaatattttaaataactatatgttctttagaatatgtgattgagaaagtgaataatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaaaatattttaaataactatatgttctttagaatatgtgattgagaaagtgaataatt 740
Query: 541 ataag 545
|||||
Sbjct: 741 ataag 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_e19.g1 MSMg01no460_e19.g1 CHROMAT_FILE:
MSMg01no460_e19.g1 PHD_FILE: MSMg01no460_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:30 2005
(478 letters)
>mm_chr5_14769082_14769956
Length = 875
Score = 845 bits (437), Expect = 0.0
Identities = 467/479 (97%), Gaps = 5/479 (1%)
Strand = Plus / Minus
Query: 1 acggccagcctggtctagatagtgagtacctggccgtttaaatctatacagtaaaactct 60
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 609 acggctagcctggtctagatagtgagtacctggccatttaaatctatacagtaaaacttt 550
Query: 61 gtctcaaaataaactgataactaataaaattaaagaaagtgattttgtaagctaattcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtctcaaaataaactgataactaataaaattaaagaaagtgattttgtaagctaattcat 490
Query: 121 gctcattaataaatgctttcttatgaacttgttacatttccatatgtctctggccccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gctcattaataaatgctttcttatgaacttgttacatttccatatgtctctggccccaag 430
Query: 181 tctatcatcagtaatataagtcacacttctaagtggagtggcag-catctttacatatca 239
|||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 429 tctatcatcagtaagataagtcac----ctaagtggagtggcagccatctttacatatca 374
Query: 240 ttcctatctacttataagtatgcaaatctgactttgtttaagtaattgaatggaaaactg 299
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 373 ttcctatctacttataagtatgcaaatctgattttgtttaagtaattgaatggaaaactg 314
Query: 300 caatatctactatagtatctttgtatattgtttagttacttttttgagttttattcattt 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 313 caatatctactatagtatctttgtatattgtttagttacttttttgagatttattcattt 254
Query: 360 tatttatataactacactgttgctgtcttcagatacaccagaaaagggcattgggtccca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tatttatataactacactgttgctgtcttcagatacaccagaaaagggcattgggtccca 194
Query: 420 ttacagatgggtgtgagccaccatgtggttgctgagaattgaactcaggacctctgaca 478
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 193 ttacagatgggtgtgagccaccatgtggttgctgggaattgaactcaggacctctgaca 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 875
Length adjustment: 10
Effective length of query: 468
Effective length of database: 865
Effective search space: 404820
Effective search space used: 404820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
