Query= MSMg01no466_e05.b1 MSMg01no466_e05.b1 CHROMAT_FILE:
MSMg01no466_e05.b1 PHD_FILE: MSMg01no466_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:41 2005
(587 letters)
>mm_chr5_9870334_9871320
Length = 987
Score = 603 bits (312), Expect = e-177
Identities = 321/324 (99%)
Strand = Plus / Minus
Query: 5 gaattccaccattacgtttacaccaaaacaaaaaaggcctgggtatgctgaagggatggg 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaattccaccattaagtgtacaccaaaacaaaaaaggcctgggtatgctgaagggatggg 265
Query: 65 agcatttgtgcacttgttttcaagaaatgcaaaccactcaagtattcatcagtagatgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agcatttgtgcacttgttttcaagaaatgcaaaccactcaagtattcatcagtagatgat 205
Query: 125 tatataaaacacacaatggaatacttttaggtgataaatgaataaactcttactttcagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tatataaaacacacaatggaatacttttaggtgataaatgaataaactcttactttcagg 145
Query: 185 aacatggataaccacaggggaattttatcatgagaattttaaaagcactggaaaacaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aacatggataaccacaggggaattttatcatgagaattttaaaagcactggaaaacaaac 85
Query: 245 ataatagcatgtcttctcatttatgcgtaggaattaaaaataattatctcagagagtacg 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 84 ataatagcatgtcttctcatttatgtgtaggaattaaaaataattatctcagagagtacg 25
Query: 305 aattttgtgccaaaggcttggaaa 328
||||||||||||||||||||||||
Sbjct: 24 aattttgtgccaaaggcttggaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_e05.g1 MSMg01no466_e05.g1 CHROMAT_FILE:
MSMg01no466_e05.g1 PHD_FILE: MSMg01no466_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:41 2005
(259 letters)
>mm_chr5_9685789_9686447
Length = 659
Score = 493 bits (255), Expect = e-144
Identities = 258/259 (99%)
Strand = Plus / Plus
Query: 1 tctgcaagtggttattattctctgggtgctttgtgtgtctgttcattcttttcccgtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcaagtggttattattctctgggtgctttgtgtgtctgttcattcttttcccgtctc 260
Query: 61 cacatttatgtttgaaaactcagttgtcaacttagcttttcttttctctgatgataatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacatttatgtttgaaaactcagttgtcaacttagcttttcttttctctgatgataatga 320
Query: 121 ggaccctaggtacatttgttcagacccagttcagggccttgaatatggcagatgtaaatg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 ggaccctaggtacatttgttcagacccagttcagggccttgaacatggcagatgtaaatg 380
Query: 181 ctctgctattgagctacacctacccagagactctccgagcattcttcttcatttttagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgctattgagctacacctacccagagactctccgagcattcttcttcatttttagtg 440
Query: 241 gtgttagtatagaatgtct 259
|||||||||||||||||||
Sbjct: 441 gtgttagtatagaatgtct 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 659
Length adjustment: 9
Effective length of query: 250
Effective length of database: 650
Effective search space: 162500
Effective search space used: 162500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
