Query= MSMg01no467_l11.b1 MSMg01no467_l11.b1 CHROMAT_FILE:
MSMg01no467_l11.b1 PHD_FILE: MSMg01no467_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:40 2005
(602 letters)
>mm_chr5_46823433_46824434
Length = 1002
Score = 1094 bits (566), Expect = 0.0
Identities = 593/602 (98%), Gaps = 2/602 (0%)
Strand = Plus / Plus
Query: 1 gcttcatggatgaccgcatccaattgaaaacaccaacctaggttaaagttaaagtcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttcatggatgaccgcatccaattgaaaacaccaacctaggttaaagttaaagtcaaca 260
Query: 61 gttaaagtaaaacataaccttatagaagatggatgttctctgcttctgttttacatgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaaagtaaaacataaccttatagaagatggatgttctctgcttctgttttacatgatg 320
Query: 121 ggcagtggccgcctacaattgtcatttgccatctcaaatccacagaagcatccacaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagtggccgcctacaattgtcatttgccatctcaaatccacagaagcatccacaacaa 380
Query: 181 agggattattttcctccaagacagctagctccagaaattcccaaatgtgtgtgttacaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggattattttcctccaagacagctagctccagaaattcccaaatgtgtgtgttacaaa 440
Query: 241 catgtgtttggctagatggtagccagatctcagtatctgaggtcccaacaagagcagcca 300
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggtgtagggctagatggtagccagatctcagtatctgaggtcccaacaagagcagcca 500
Query: 301 aaggcaaaaaaatcacaaacaacaaacaaacaaacaaacaaacaaacaaacacaatggag 360
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 aaggcaaaaaa-tcacaaacaacaaacaaacaaacaaacaaacaaacaaaaacaatggag 559
Query: 361 aatgttacaaatggggaggcatggggacctctgagcacagaccagcaattgtgaaagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatgttacaaatggggaggcatggggacctctgagcacagaccagcaattgtgaaagaaa 619
Query: 421 gaatgatgatgaaggtgttagggaagaaccagaggacttctgaaagtatcattgcatatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaatgatgatgaaggtgttagggaagaaccagaggacttctgaaagtatcattgcatatc 679
Query: 481 catgtagcacaaggtactggtactttgaggtccatccctctgaatatgtatgtgttttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catgtagcacaaggtactggtactttgaggtccatccctctgaatatgtatgtgttttta 739
Query: 541 atgtgcatacctgtatatgttctagagcaaattcctttatttttctagaaaatcctttta 600
|||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 740 atgtgcatacctgtatatgttctagagcaatttcctttatttttgta-aaaatcctttta 798
Query: 601 aa 602
||
Sbjct: 799 aa 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_l11.g1 MSMg01no467_l11.g1 CHROMAT_FILE:
MSMg01no467_l11.g1 PHD_FILE: MSMg01no467_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:40 2005
(486 letters)
>mm_chr5_46931011_46931896
Length = 886
Score = 909 bits (470), Expect = 0.0
Identities = 481/485 (99%)
Strand = Plus / Minus
Query: 1 cattgctactgaaattgtgagagttacaaccttcacctaggaggggcaagcaccctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cattgctactgaaattgtgagagttacaaccttcacctaggaggggcaagcaccctcctg 487
Query: 61 attgttatcctgggtgcaggaaccaaggttcacctgaacatgaagaacactaatacagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 486 attgttatcctgggtgcaggaaccaaggttcacctgaacatgaagaacattaatacagtt 427
Query: 121 gagaaagaatagctcagtttgcttttctgctaggcaaatccagaatgttacaggatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gagaaagaatagctcagtttgcttttctgctaggcaaatccagaatgttacaggatgtga 367
Query: 181 tgtggaaatttttaatgtgccatctttacaaaaacattcaaacgtcaaagactgggaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgtggaaatttttaatgtgccatctttacaaaaacattcaaacgtcaaagactgggaccc 307
Query: 241 atgatggttacactgatgttttagaagtacgttaacttctaaataaactttgtaatatct 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atgacggttacactgatgttttagaagtacgttaacttctaaataaactttgtaatatct 247
Query: 301 gtcatggcattttgaaaaggcgaaatttgtcaactcattttataaattttcaacatgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtcatggcattttgaaaaggcgaaatttgtcaactcattttataaattttcaacatgaca 187
Query: 361 tttttatggattacttgtgatttcatatcatgtgccccaaccatattcacttcccatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tttttatggattacttgtgatttcatatcatgtgccccaaccatattcacttcccatttg 127
Query: 421 tctcaggttcccctcacccttgtgataccctccccgaanaaagagaaggagggggtgagg 480
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 126 tctcaggttcccctcacccttgtgataccctccccgaaaaaagaggaggagggggtgagg 67
Query: 481 aggaa 485
|||||
Sbjct: 66 aggaa 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
