ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAA
TTCTCACCTGTTGCATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTC
AACACCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAAATTCC
ACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGA
TGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGA
TTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAA
AATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATA
TATCCAGAAGAAGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGTT
CATAGAAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCC
CCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAG
TACTACTCAGCTATTAACAAGAATGAATTTATGACATTCCTAGCCAAATG
GATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAACCATTCCCAAAGGA
ACTCACACTATATGCTCTCACTGATAAGCGGCTTATAACCCCCAATCCAT
TTATATCCTGAAATCAGATATCCCTTTCCTTTTTCCTGAAACTCCTCCAC
AAATGAGCGCTGTTTTTGTGTCCCTATTTCCCTCTTTTACAAATG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTATCACTCTAAACTTGGTCATCTTCTG
TGTGTTCCTGTCTCCCTAACTAGTAAACAAATTAGACTTTGTGTTTCATG
TTAGTGTCCTTTATGGGTAAGGCAGATGGTTCTCTACATTCTTGAGATGT
GATTGGCTTTTCCGTGTAAACTTTTATGCTTCTGATTCCATATCACTTTG
CTTATTTCATTTTGCAGTTCTGTGACTACCTGTGAGGCAACTTGGGGAAA
AGGGTAATATTTTATTATTTCTGCACAGGGACGTTTGATGCTAACCCTAA
TGTCCAAGTGCTAATAAAAACAGAAAGTATTACATATTCATATTCACACA
TTTATAGCCTTCTACCAGTGTTATAAAAATATTTATATCGGAAAAGTTAC
AAACAGCCTGCTAGGAACTGGTGCTCCATGAATGTATTGTTCCAGAAAAA
CTACTTCCCCCTGAACTGAATTTGCATATATCTTTGTAGTGCAGTGGTGA
ATATTTTATGTTTGTTCATAGACTTTATACTTTGAGACTGATAGCGACGC
AGCTAATTTCTCCACTATTGGTCAAGCTGATAATCATATCATTTTCCTAC
AGCCATGTGTTTTACCAAATACCTAAATCCTCTTATAATCTTTACTCCCA
GATTATTAACCTCAGCGTTTTTGG

Query= MSMg01no467_o03.g1 MSMg01no467_o03.g1 CHROMAT_FILE:
MSMg01no467_o03.g1 PHD_FILE: MSMg01no467_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:53 2005
         (473 letters)



>mm_chr5_55152853_55153724
          Length = 872

 Score =  861 bits (445), Expect = 0.0
 Identities = 466/477 (97%), Gaps = 9/477 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   attatcactctaaacttggtcatcttctgtgtgttcctgtctccctaactagtaaacaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatcactctaaacttggtcatcttctgtgtgttcctgtctccctaactagtaaacaaa 260

                                                                       
Query: 61  ttagactttgtgtttcatgttagtgtcctttatgggtaaggcagatggttctctacattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagactttgtgtttcatgttagtgtcctttatgggtaaggcagatggttctctacattc 320

                                                                       
Query: 121 ttgagatgtgattggcttttccgtgtaaacttttatgcttctgattccatatcactttgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgagatgtgattggcttttccgtgtaaacttttatgcttctgattccatatcactttgc 380

                                                                       
Query: 181 ttatttcattttgcagttctgtgactacctgtgaggcaacttggggaaaagggtaatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 381 ttatttcattttgcagttctgtgactacctgtgaggcaacttggggaaaagggtaatag- 439

                                                                       
Query: 241 ttattattt----ctgcacagggacgtttgatgctaaccctaatgtccaagtgctaataa 296
             || ||      |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 --ataat--aaacctgcacagggacgtttgatgctaaccctaatgtccaagtgctaataa 495

                                                                       
Query: 297 aaacagaaagtattacatattcatattcacacatttatagccttctaccagtgttataaa 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaacagaaagtattacatattcatattcacacatttatagccttctaccagtgttataaa 555

                                                                       
Query: 357 aatatttatatcggaaaagttacaaacagcctgctaggaactggtgctccatgaatgtat 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatatttatatcggaaaagttacaaacagcctgctaggaactggtgctccatgaatgtat 615

                                                                    
Query: 417 tgttccagaaaaactacttccccctgaactgaatttgcatatatctttgtagtgcag 473
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgttccagaaaaactacttccccctgaactgaatttgcatatatctttgtagtgcag 672


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 872
Length adjustment: 10
Effective length of query: 463
Effective length of database: 862
Effective search space:   399106
Effective search space used:   399106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)