Query= MSMg01no468_b13.b1 MSMg01no468_b13.b1 CHROMAT_FILE:
MSMg01no468_b13.b1 PHD_FILE: MSMg01no468_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:10 2005
(510 letters)
>mm_chr5_69268762_69269669
Length = 908
Score = 928 bits (480), Expect = 0.0
Identities = 499/506 (98%), Gaps = 2/506 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaattaaattctcatccccttttagtgaggcaaaagtttagccagcctttccct 64
|||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaattaaaacctaatcccgttttagtgaggcaaaagtttagccagcctttccct 264
Query: 65 tgcatgccatccagtacttttctaaggtgttcaatctttgttacagatacacctttttgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcatgccatccagtacttttctaaggtgttcaatctttgttacagatacacctttttgc 324
Query: 125 cgcatcctacaaagttcaatttaaaatgtataagaaactctgtgcttccatggcatttct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgcatcctacaaagttcaatttaaaatgtataagaaactctgtgcttccatggcatttct 384
Query: 185 ccaaggctacaaatcgtgttttctgctttctttcatgtatgaaaattaatcactttggga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaaggctacaaatcgtgttttctgctttctttcatgtatgaaaattaatcactttggga 444
Query: 245 ggattaaagcctttttttctttttcggcaggaagccagattctattccaggctccatggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggattaaagcctttttttctttttcggcaggaagccagattctattccaggctccatggt 504
Query: 305 taatacaatattaaagaggagagaaaaaaaaaatgtgagtttgtgcattttaaaatccag 364
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 505 taatacaatattaaagagaagagaaaaaaaa--tgtgagtttgtgcattttaaaatccag 562
Query: 365 gttctgatcctgctgaaatatttctggattctccattcctgtccagcctaatgttggatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gttctgatcctgctgaaatatttctggattctccattcctgtccagcctaatgttggatc 622
Query: 425 ttggaaaagctgaaacttacttgaatttgtacggattcatttcacgatagtagtagcaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttggaaaagctgaaacttacttgaatttgtacggattcatttcacgatagtagtagcaaa 682
Query: 485 cagaactatctactgaagaactaata 510
||||||||||||||||||||||||||
Sbjct: 683 cagaactatctactgaagaactaata 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 908
Length adjustment: 10
Effective length of query: 500
Effective length of database: 898
Effective search space: 449000
Effective search space used: 449000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_b13.g1 MSMg01no468_b13.g1 CHROMAT_FILE:
MSMg01no468_b13.g1 PHD_FILE: MSMg01no468_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:10 2005
(250 letters)
>mm_chr5_69375905_69376554
Length = 650
Score = 422 bits (218), Expect = e-122
Identities = 242/250 (96%)
Strand = Plus / Minus
Query: 1 ttttcagtcacctttgatcctgttcattgtgtggatgcttcttgcacctgattctttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttttcagtcacctttgatcctgttcattgtgtggatgcttcttgcacctgattctttctg 391
Query: 61 aaatatttacctgtatatggttttatattgtcatctctaggccactgttcttcattatta 120
|||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 390 aaatgtttacctgtatatggttttatagtgtcatctctaggccactgttctttattatta 331
Query: 121 agtcctaaatcaatagatgtatattaccctttgttatgatgctctctttatattcagagc 180
||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 330 agtcctaaatcaacagatgtatattatcctttgttatgatgctctcgttatattcagagc 271
Query: 181 attcaataattcctcttcaggggaatttttattttataatctctttcccatgtctcccta 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 270 attcaataattcctcttcaggggaatttttattttataatctttttcccatgtcttccta 211
Query: 241 taaaatttaa 250
||||||||||
Sbjct: 210 taaaatttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
