NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGAATCCG
CGGAATTCTTTGTTTTACTCTGTACCCCATTTTAATGGGGATATTTGGTT
TTCTAGAGTCCATCTCCTTGAGTTCTTTATATATATTGGATATTAGTCTC
CTATCTGATTTAGGACTGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT
TTTTGTCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTG
TGAGGTCCCATTTGTCAACTCTTGATCTTAGAGCACAAGCCATTGCTGTT
CTATTCAGGAACTTATCCTCTGTTTTTTTATCTTTGAGGCTTTTCCCCAC
TTTCTCCTCTATACTTTTCAGTGTCTCTGGTTTTATGTGGTGTTGCTTGA
TCCACTTACACTTGACCTTACCATATGGAGATCAGTATGGATCACTTTGC
ATTTTTCTACCTGATAACTGCCCGACATGTCTTCTTTTTTTTGCTCACTA
ACGTTCGTCCCCTTCCCCTACTATACGCCCCTTAGTCTCCCTTGTCCTAT
CTATCCCTTGATCTACTCTGTCTGCTCTTCTCTTCCTTGTTCTCTCTTCA
TCCCACCCTATTTTTTTCTTTCCCCCCTTCCTGTCTTTTCTCTCTTTCCT
CCGCTCCCTTCTTATCCCTCCCCTCCCCTTTGAATTCTTTCCTTTTCTTT
GCCTCCTCCCCTCCCCTTTTTTTTCCTCCTTCTTTTCCCCTCCTTCTTTC
TTTTCTCTTCGCTCCCTCCTCTCCCTTATTCTTCCCTACTCCCTCCTATT
TCTCCCCCTCTCN

CACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATTCTCCATTTCTATTAATGTCT
ATTATTATGTAGTAACAACAAAGTTTCTTCATTTTCTCCAAAATTAACAT
CACAACATACACATGTAGTTAAATATGACCATTTACATATATGTATACTG
CTTCTGTTCATTCTATTTCAAAATTATTTTTTTCTGGGCATGTATATAAT
TTTATTTGGCATGGATTCAACAGAATGCAAGAGTAAATTAAATTTCATTC
ATTTCATCTTATCTTTAGTTATGCCTATCTACCTTTTAATGTCCTTTCTT
CACAGTTTGATCTTTCTTTTCTTTCCTTAATAAAAAGAATATGTATTTGC
ATTGAAAAATCAAGGATTACTGATACCCCACAGAATATGCCACACCAATG
TATTGATAATCTCAAACTCAAAACATTGAAAGCACCTCTGTCTGGCATGT
CCTTCCAAACATGCAGGACATCAAAATGATCCTTTTGAAGAAATTATTTT
CCTGTTTCAGCACTACCATATAGTCTTTGTCTTTTTTTACTGCAAATTGG
TATTCCACGTACGTACGACGAAAAATTCAATCCATCAGCTTGTGAAGACT
TTTAATCTCCCGACAATTTTGCCAAAAAATTTTTTTTTTCTTCCCACACT
TTATTTATTATTTTATTTTCCGATTTAACGATCTCCTCGCCCCTTTATTC
CTATTCTT

Query= MSMg01no470_p08.g1 MSMg01no470_p08.g1 CHROMAT_FILE:
MSMg01no470_p08.g1 PHD_FILE: MSMg01no470_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:02 2005
         (479 letters)



>mm_chr5_84004195_84005073
          Length = 879

 Score =  859 bits (444), Expect = 0.0
 Identities = 471/480 (98%), Gaps = 2/480 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctccatttctattaatgtctattattatgtagtaacaacaaagtttcttcattttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctccatttctattaatgtctattattatgtagtaacaacaaagtttcttcattttct 260

                                                                       
Query: 61  ccaaaattaacatcacaacatacacatgtagttaaatatgaccatttacatatatgtata 120
           ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 ccaaaatgaacatcacaacatacacatgtagttaaacatgaccatttacatatatgtata 320

                                                                       
Query: 121 ctgcttctgttcattctatttcaaaattatttttttctgggcatgtatataattttattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcttctgttcattctatttcaaaattatttttttctgggcatgtatataattttattt 380

                                                                       
Query: 181 ggcatggattcaacagaatgcaagagtaaattaaatttcattcatttcatcttatcttta 240
            |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 -gcatggattcaacagaattcaagagtaaattaaattttattcatttcatcttatcttta 439

                                                                       
Query: 241 gttatgcctatctaccttttaatgtcctttcttcacagtttgatctttcttttctttcct 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttatgccaatctaccttttaatgtcctttcttcacagtttgatctttcttttctttcct 499

                                                                       
Query: 301 taataaaaagaatatgtatttgcattgaaaaatcaaggattactgataccccacagaata 360
           |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 500 taataaaaagaatatgtatttgcattgaaaaatcaaggattattgataccacacagaata 559

                                                                       
Query: 361 tgccacaccaatgtattgataatctcaaactcaaaacattg-aaagcacctctgtctggc 419
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 tgccacaccaatgtattgataatctcaaactcaaaacattgtaaagcacctctgtctggc 619

                                                                       
Query: 420 atgtccttccaaacatgcaggacatcaaaatgatccttttgaagaaattattttcctgtt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgtccttccaaacatgcaggacatcaaaatgatccttttgaagaaattattttcctgtt 679


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space:   407561
Effective search space used:   407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)