TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTGTTCCCGGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCGAG
AATTTTATTGAGTATTTTTGAATAGATATTCATAAGGGAAATTGATCTGA
AGTTCTCTATCTTTGTTTGGTCTTTCTGTGGTTTAGGTATCAGAGTAATT
GTGGCTTCAAAGAAAGAATTGGGGAGAGTGCCTTATGCTTCTATTTTGTG
GAATAGTTTGTGAAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGA
ACTCTGCACTAAACCCATCTGGTCCTGGGCTTTTTGTTTGTTTGTTTGTT
TGTTTGTTTGTTTGTTTGTTTGTTTGTTGGGAGACTAGTAATGACTGCTT
CTATTTCTTTAGGGGATATAGGACAGTTTAGATCATTAACCTGATCCTGA
TGTAAATTTGTTATCTGGTATCTGTCTAGAAATTTGTCCATTTCATCCAG
GTTTTCCACTTTTGTAGAGTATAGTCTTTTGTAGAAGGATCTGATGGTGT
TTTGGATTTCTGCAGGATCTGTTGTTATGTCTCCCTTTTCATTTCTGATT
TTGTTAATGAAGATGCTGTCCCTGTGCCCTCTAGCGAGTCTGGATAAGGA
TTTATCTATCTTGTTGATTTTCTTAAGGAACCAGCTCTCCCGGTTTTGTT
GTTTCTTTGTATAGTTCTTTTTGTTTACACTTGGTTGATTTCAGCCCN

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTTTCCCGGACTGGCCTTGAACTCA
GAGATCTGCATGCCTCTGTCTCCTTGAATTAAAGTGTGTACTATTTTGCC
TGTTTTTTTTTTAATTTTATTTGTTTATTTATTTATTTATTTATTTATTT
ATTTATTTATTTATTTATTTATTTATTTATTATTGCCACTATGCCTCGAG
ATCCAGATTAAAAGCCTGTGTCTTCCAGCCGTATGATCTGGCTCATACGT
GTGCCCTCCATTTCTGAACTGTAGTTTATTGCAAATATAGTCAAGTTGAC
AACTTGGAATAGCCTTCACACCTTCCCACTATGAATTGTGAATCAAGATA
AATCTCTCTTTTCCTTTTATCAACTATTTTTACTGAAACAAAGAGAAAAG
AACTAATACAGCTCCTAACATCATGGAAACACATTCTCTCTAATTCAAGG
TTAGTTGTCTCATGTGGGAATAGGTAAAATTTTAAGTACCCAATTCTTAC
TTTATCAAAGAGTTTATAAAAATGAAGGTTCATAGTAAGAATCACTCAGC
AGATTCATGCACAGAATTGTGGCCCTCACCATCTTCATGATTATAGTTCT
AGAGTACTTATTTTAAAATTTTCTAAAGACCATGTTAAAGACTTGTTTCA
TCATTGATACAATACAATTAGTATGGTTATATTAATATTATAAAAT

Query= MSMg01no471_d15.g1 MSMg01no471_d15.g1 CHROMAT_FILE:
MSMg01no471_d15.g1 PHD_FILE: MSMg01no471_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:25 2005
         (672 letters)



>mm_chr5_7441248_7442319
          Length = 1072

 Score =  988 bits (511), Expect = 0.0
 Identities = 526/531 (99%)
 Strand = Plus / Minus

                                                                        
Query: 140  tttatttatttatttattattgccactatgcctcgagatccagattaaaagcctgtgtct 199
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1027 tttatttatttatttattattgccactatgccttgagatccagattaaaagcctgtgtct 968

                                                                        
Query: 200  tccagccgtatgatctggctcatacgtgtgccctccatttctgaactgtagtttattgca 259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967  tccagccgtatgatctggctcatacgtgtgccctccatttctgaactgtagtttattgca 908

                                                                        
Query: 260  aatatagtcaagttgacaacttggaatagccttcacaccttcccactatgaattgtgaat 319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907  aatatagtcaagttgacaacttggaatagccttcacaccttcccactatgaattgtgaat 848

                                                                        
Query: 320  caagataaatctctcttttccttttatcaactatttttactgaaacaaagagaaaagaac 379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847  caagataaatctctcttttccttttatcaactatttttactgaaacaaagagaaaagaac 788

                                                                        
Query: 380  taatacagctcctaacatcatggaaacacattctctctaattcaaggttagttgtctcat 439
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 787  taatatagctcctaacatcatggaaacacattctctctaattcaaggttagttgtctcgt 728

                                                                        
Query: 440  gtgggaataggtaaaattttaagtacccaattcttactttatcaaagagtttataaaaat 499
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 727  gtgggaataggtaaaattttaagtacccaattcttactttatcgaagagtttataaaaat 668

                                                                        
Query: 500  gaaggttcatagtaagaatcactcagcagattcatgcacagaattgtggccctcaccatc 559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667  gaaggttcatagtaagaatcactcagcagattcatgcacagaattgtggccctcaccatc 608

                                                                        
Query: 560  ttcatgattatagttctagagtacttattttaaaattttctaaagaccatgttaaagact 619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607  ttcatgattatagttctagagtacttattttaaaattttctaaagaccatgttaaagact 548

                                                               
Query: 620  tgtttcatcattgatacaatacaattagtatggttatattaatattataaa 670
            ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 547  tgtttcatcattgatacaatacaattagtatggttatattattattataaa 497


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)