TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAATCCGCGGA
ATTCATTGATAGATGCCGATTAATTTCAGCACTCTCTTTTAAGAGAGGTT
TCAGTAACTGTGGGTGTTTTGTTGGTTAGTTGGAAAGCCTATTCCAGATG
CTTAAAATATCCTTCCTTATACTTCTGCTATAGAAACATGTCTGACATCA
AAACCTGTATTAGTAAGAGTTCTCTGGAGAAACAGAACTAATAGAATTAT
ATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAG
AGAGNGNGNNNNNNNNNNNNNTTTTTTTTTTTNNNGNNNNGGGNGNGGGG
GGGGNNGGGNGGTTTTTTTTTTGCGCGCGTTTCTTTTGNGTGTGNGNGTG
TTTTTGTNTTGNTTTGGNTTTTTTCGTTGTTTGTTTGTGTTGTTTCTTTT
GTGTGTGTGCGGGTCGGTTTTGTCTCCGCTTGCGTTCGTTGTGCGCGTCT
TTTCCTTCCGTGTGTGTTCCTCGCGTGCGCGCTCNTTTTCTCGCGCTCCT
GTGCTCCGCTCTCTCCCGCTCTTTTTCTGTCTCCGTTTTGTTTTTTGTCG
TCCTCCTCTCTTTCGTTTCCTCGTTTTTGGTCTTCTCCTCTTTTCTGCGC
TCTTCTTGCCTTCCTGCTTTTTTTTTTTTTCTTTTTCCTTCCTTCCCCTT
CTTTTTCTTTCCTTCCTTGCTCCTTCGGCTCCGCTTTCTTGTTCCCCTCC
TTTCCTCCTCCTTCTCCCCCCG

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTCACTATGGAAGGCCAGCAGTAGTA
AGGTGAGAAAAATTAATTCCGATAGCTTATAGATTGCATCTATGATTAAA
AACCCACTGTCAGATTTTATTCTTGATTTTAGAGCTGCAAGGGCTAAAGA
TAGATTAGAAGCTGGGCTGGATTAAAAGTCTTGATTCTAATGCTTTCTCT
CCACTGACTAGTAGGTCTCCCAATGGAGCCATACAATGTCTCCGTACTCT
ATAGTTTCTCCATGGGTAATCTAGTAATTACTAGCGACTAACTCTCAAAC
TCAGTAGGAGAAATAAAAATGAAATGTTATATGCAAGAATATTATTCTCA
AATTTAAGTGAATAAAGGGAAAAAAGGAAAGTTTTTATATCCAATATTTT
AAAGCAATAGTTCCCCTTGAAGTAGGTTAGGTTGAACCTTCAAACTTGTG
AACTTGTGTGTGTGTGTGCATGTGTGTGTGTAAATATATATATATATATA
TATATACACATCAGCAAGAAGTTATAGAGGGTAGAATACAAATAATTTCA
ACTAAGTTATGACTCATACTCCTCTTTTTACTGTGATTTTCTTAAGTCTA
CTAATAATAATGGTTTTAACTGCTGAACGGTAAACTTGTCAAAAGCATTA
TATTTAGACTGCTTAACTCTAAGATGAATGTATTCCAAAGGCATCTGTCA
TGGCCAACAAT

Query= MSMg01no473_k11.g1 MSMg01no473_k11.g1 CHROMAT_FILE:
MSMg01no473_k11.g1 PHD_FILE: MSMg01no473_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:49 2005
         (562 letters)



>mm_chr5_63014516_63015477
          Length = 962

 Score = 1071 bits (554), Expect = 0.0
 Identities = 560/562 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcactatggaaggccagcagtagtaaggtgagaaaaattaattccgatagcttataga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcactatggaaggccagcagtagtaaggtgagaaaaattaattccgatagcttataga 260

                                                                       
Query: 61  ttgcatctatgattaaaaacccactgtcagattttattcttgattttagagctgcaaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcatctatgattaaaaacccactgtcagattttattcttgattttagagctgcaaggg 320

                                                                       
Query: 121 ctaaagatagattagaagctgggctggattaaaagtcttgattctaatgctttctctcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaagatagattagaagctgggctggattaaaagtcttgattctaatgctttctctcca 380

                                                                       
Query: 181 ctgactagtaggtctcccaatggagccatacaatgtctccgtactctatagtttctccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgactagtaggtctcccaatggagccatacaatgtctccgtactctatagtttctccat 440

                                                                       
Query: 241 gggtaatctagtaattactagcgactaactctcaaactcagtaggagaaataaaaatgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtaatctagtaattactagcgactaactctcaaactcagtaggagaaataaaaatgaa 500

                                                                       
Query: 301 atgttatatgcaagaatattattctcaaatttaagtgaataaagggaaaaaaggaaagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgttatatgcaagaatattattctcaaatttaagtgaataaagggaaaaaaggaaagtt 560

                                                                       
Query: 361 tttatatccaatattttaaagcaatagttccccttgaagtaggttaggttgaaccttcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttatatccaatattttaaagcaatagttccccttgaagtaggttaggttgaaccttcaa 620

                                                                       
Query: 421 acttgtgaacttgtgtgtgtgtgtgcatgtgtgtgtgtaaatatatatatatatatatat 480
           |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 621 acttgtgaacttgtgtgtgtgtgtgcatgtgtgtgtataaataaatatatatatatatat 680

                                                                       
Query: 481 atacacatcagcaagaagttatagagggtagaatacaaataatttcaactaagttatgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacacatcagcaagaagttatagagggtagaatacaaataatttcaactaagttatgac 740

                                 
Query: 541 tcatactcctctttttactgtg 562
           ||||||||||||||||||||||
Sbjct: 741 tcatactcctctttttactgtg 762


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space:   525504
Effective search space used:   525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)