Query= MSMg01no474_c16.b1 MSMg01no474_c16.b1 CHROMAT_FILE:
MSMg01no474_c16.b1 PHD_FILE: MSMg01no474_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:31 2005
(103 letters)
>mm_chr5_33136998_33137500
Length = 503
Score = 192 bits (99), Expect = 7e-54
Identities = 102/103 (99%)
Strand = Plus / Plus
Query: 1 accacttccaatggtaacaaacaacatgcactgtcctgcatggggctcttacctacgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accacttccaatggtaacaaacaacatgcactgtcctgcatggggctcttacctacgaaa 260
Query: 61 gaccctgagcttattttcatttaattaacactgtccgattcgc 103
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gaccctgagcttattttcatttaattaacattgtccgattcgc 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 103
Length of database: 503
Length adjustment: 8
Effective length of query: 95
Effective length of database: 495
Effective search space: 47025
Effective search space used: 47025
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no474_c16.g1 MSMg01no474_c16.g1 CHROMAT_FILE:
MSMg01no474_c16.g1 PHD_FILE: MSMg01no474_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:31 2005
(192 letters)
>mm_chr5_33316899_33317492
Length = 594
Score = 325 bits (168), Expect = 1e-93
Identities = 187/194 (96%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 1 tgtttgcctcatgtgcacagaaccaaaataaccaggcaaatgcacacattcagcctgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 394 tgtttgcctcatgtgcacagaaccaaaataaccaggcaaatgcacacattcagcccgctg 335
Query: 61 gactcatgagctgcacatctacagagtcaatcacatacatggaaagtatttggggg--gg 118
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 334 gactcatgagctgtacatctacagagtcaatcacatacatggaaagtatttgggggaggg 275
Query: 119 gggcaggagagtatttacactgaatatgagtaaacttttcttgtttcctcaacaatgcaa 178
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||
Sbjct: 274 gggcaggagagtatttacattgaatatgagtaaacttttcttgtttcctgaacaatacaa 215
Query: 179 tataatatagcagt 192
||||||||||||||
Sbjct: 214 tataatatagcagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 594
Length adjustment: 8
Effective length of query: 184
Effective length of database: 586
Effective search space: 107824
Effective search space used: 107824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
